Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
SPCS1Q9Y6A9 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC12.77□□□□□ -0.36
SPCS1Q9Y6A9 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SPCS1Q9Y6A9 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SPCS1Q9Y6A9 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SPCS1Q9Y6A9 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SPCS1Q9Y6A9 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC12.77□□□□□ -0.37
SPCS1Q9Y6A9 AC007029.1-201ENST00000604183 313 ntBASIC12.77□□□□□ -0.37
SPCS1Q9Y6A9 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SPCS1Q9Y6A9 AC087239.1-201ENST00000622671 572 ntBASIC12.77□□□□□ -0.37
SPCS1Q9Y6A9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
SPCS1Q9Y6A9 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SPCS1Q9Y6A9 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SPCS1Q9Y6A9 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SPCS1Q9Y6A9 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SPCS1Q9Y6A9 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC12.77□□□□□ -0.37
SPCS1Q9Y6A9 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.37
SPCS1Q9Y6A9 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SPCS1Q9Y6A9 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC12.77□□□□□ -0.37
SPCS1Q9Y6A9 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SPCS1Q9Y6A9 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
SPCS1Q9Y6A9 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SPCS1Q9Y6A9 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SPCS1Q9Y6A9 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SPCS1Q9Y6A9 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SPCS1Q9Y6A9 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SPCS1Q9Y6A9 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SPCS1Q9Y6A9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SPCS1Q9Y6A9 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 CASK-202ENST00000378158 3848 ntTSL 5 BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 AC068587.7-201ENST00000641602 218 ntBASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS1Q9Y6A9 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
SPCS1Q9Y6A9 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms