Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 PP12613-201ENST00000424958 2230 ntBASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAPPC1Q9Y5R8 FEM1AP3-201ENST00000403722 1741 ntBASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 PRTG-204ENST00000561292 833 ntTSL 3 BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 MST1L-201ENST00000442552 2185 ntBASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 AP001094.4-201ENST00000579008 2176 ntBASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC1Q9Y5R8 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 SAPCD2P1-201ENST00000395413 1184 ntBASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 AC091799.1-201ENST00000422823 811 ntBASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 AC068587.6-202ENST00000641839 5619 ntBASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC1Q9Y5R8 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAPPC1Q9Y5R8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms