Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHB1Q9Y5F3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB1Q9Y5F3 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
PCDHB1Q9Y5F3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB1Q9Y5F3 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.6■□□□□ 0.57
PCDHB1Q9Y5F3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHB1Q9Y5F3 TPM4P1-201ENST00000436100 807 ntBASIC18.6■□□□□ 0.57
PCDHB1Q9Y5F3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHB1Q9Y5F3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.6■□□□□ 0.57
PCDHB1Q9Y5F3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHB1Q9Y5F3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHB1Q9Y5F3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.6■□□□□ 0.57
PCDHB1Q9Y5F3 AL121956.5-201ENST00000625261 221 ntBASIC18.6■□□□□ 0.57
PCDHB1Q9Y5F3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
PCDHB1Q9Y5F3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB1Q9Y5F3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB1Q9Y5F3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB1Q9Y5F3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PCDHB1Q9Y5F3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
PCDHB1Q9Y5F3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB1Q9Y5F3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB1Q9Y5F3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHB1Q9Y5F3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB1Q9Y5F3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHB1Q9Y5F3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB1Q9Y5F3 MTMR9LP-203ENST00000426597 1545 ntBASIC18.59■□□□□ 0.57
PCDHB1Q9Y5F3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHB1Q9Y5F3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB1Q9Y5F3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB1Q9Y5F3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB1Q9Y5F3 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB1Q9Y5F3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHB1Q9Y5F3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
PCDHB1Q9Y5F3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PCDHB1Q9Y5F3 IER3-202ENST00000376377 1350 ntBASIC18.59■□□□□ 0.57
PCDHB1Q9Y5F3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB1Q9Y5F3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB1Q9Y5F3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PCDHB1Q9Y5F3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.59■□□□□ 0.57
PCDHB1Q9Y5F3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHB1Q9Y5F3 AL359075.1-203ENST00000462729 1002 ntBASIC18.59■□□□□ 0.57
PCDHB1Q9Y5F3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB1Q9Y5F3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.59■□□□□ 0.57
PCDHB1Q9Y5F3 AL023803.3-201ENST00000615559 522 ntBASIC18.59■□□□□ 0.57
PCDHB1Q9Y5F3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHB1Q9Y5F3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHB1Q9Y5F3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHB1Q9Y5F3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB1Q9Y5F3 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.59■□□□□ 0.57
PCDHB1Q9Y5F3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
PCDHB1Q9Y5F3 RCC2P3-201ENST00000418112 1537 ntBASIC18.59■□□□□ 0.57
PCDHB1Q9Y5F3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHB1Q9Y5F3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.58■□□□□ 0.57
PCDHB1Q9Y5F3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PCDHB1Q9Y5F3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHB1Q9Y5F3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.58■□□□□ 0.57
PCDHB1Q9Y5F3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHB1Q9Y5F3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHB1Q9Y5F3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB1Q9Y5F3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB1Q9Y5F3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDHB1Q9Y5F3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PCDHB1Q9Y5F3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB1Q9Y5F3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.58■□□□□ 0.56
PCDHB1Q9Y5F3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB1Q9Y5F3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHB1Q9Y5F3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHB1Q9Y5F3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.58■□□□□ 0.56
PCDHB1Q9Y5F3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDHB1Q9Y5F3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.58■□□□□ 0.56
PCDHB1Q9Y5F3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB1Q9Y5F3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB1Q9Y5F3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PCDHB1Q9Y5F3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHB1Q9Y5F3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PCDHB1Q9Y5F3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB1Q9Y5F3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB1Q9Y5F3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB1Q9Y5F3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHB1Q9Y5F3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB1Q9Y5F3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms