Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.05■□□□□ 0.16
MRPS28Q9Y2Q9 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.05■□□□□ 0.16
MRPS28Q9Y2Q9 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.05■□□□□ 0.16
MRPS28Q9Y2Q9 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRPS28Q9Y2Q9 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.05■□□□□ 0.16
MRPS28Q9Y2Q9 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRPS28Q9Y2Q9 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.05■□□□□ 0.16
MRPS28Q9Y2Q9 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
MRPS28Q9Y2Q9 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
MRPS28Q9Y2Q9 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRPS28Q9Y2Q9 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.05■□□□□ 0.16
MRPS28Q9Y2Q9 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.05■□□□□ 0.16
MRPS28Q9Y2Q9 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
MRPS28Q9Y2Q9 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 AC112777.1-201ENST00000540175 1423 ntBASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 KRASP1-201ENST00000407852 552 ntBASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 AC239809.2-201ENST00000415381 517 ntBASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 KRT16P5-201ENST00000455284 522 ntBASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 PRSS44-201ENST00000515154 1146 ntBASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.04■□□□□ 0.16
MRPS28Q9Y2Q9 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 KRT8P3-201ENST00000519669 1449 ntBASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 AC131212.4-201ENST00000623606 975 ntBASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 AL023875.1-201ENST00000640777 796 ntBASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
MRPS28Q9Y2Q9 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MRPS28Q9Y2Q9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
MRPS28Q9Y2Q9 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
MRPS28Q9Y2Q9 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.02■□□□□ 0.16
MRPS28Q9Y2Q9 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MRPS28Q9Y2Q9 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MRPS28Q9Y2Q9 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.02■□□□□ 0.16
MRPS28Q9Y2Q9 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
MRPS28Q9Y2Q9 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.02■□□□□ 0.16
MRPS28Q9Y2Q9 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MRPS28Q9Y2Q9 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.02■□□□□ 0.16
MRPS28Q9Y2Q9 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
MRPS28Q9Y2Q9 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MRPS28Q9Y2Q9 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
MRPS28Q9Y2Q9 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
MRPS28Q9Y2Q9 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 9 ms