Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP2BQ9UQN3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP2BQ9UQN3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.96■□□□□ 0.63
CHMP2BQ9UQN3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.96■□□□□ 0.63
CHMP2BQ9UQN3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.96■□□□□ 0.63
CHMP2BQ9UQN3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP2BQ9UQN3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP2BQ9UQN3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
CHMP2BQ9UQN3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CHMP2BQ9UQN3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP2BQ9UQN3 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP2BQ9UQN3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.96■□□□□ 0.63
CHMP2BQ9UQN3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.96■□□□□ 0.63
CHMP2BQ9UQN3 AP002982.1-201ENST00000492365 877 ntBASIC18.96■□□□□ 0.63
CHMP2BQ9UQN3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CHMP2BQ9UQN3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP2BQ9UQN3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.96■□□□□ 0.63
CHMP2BQ9UQN3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP2BQ9UQN3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CHMP2BQ9UQN3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP2BQ9UQN3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP2BQ9UQN3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP2BQ9UQN3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP2BQ9UQN3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CHMP2BQ9UQN3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.96■□□□□ 0.63
CHMP2BQ9UQN3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP2BQ9UQN3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP2BQ9UQN3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP2BQ9UQN3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP2BQ9UQN3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 RN7SL471P-201ENST00000580476 299 ntBASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 AC135776.1-201ENST00000319817 2481 ntBASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 HTR7P1-201ENST00000538670 1336 ntBASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHMP2BQ9UQN3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP2BQ9UQN3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CHMP2BQ9UQN3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP2BQ9UQN3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.94■□□□□ 0.62
CHMP2BQ9UQN3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.94■□□□□ 0.62
CHMP2BQ9UQN3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CHMP2BQ9UQN3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP2BQ9UQN3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP2BQ9UQN3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP2BQ9UQN3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CHMP2BQ9UQN3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP2BQ9UQN3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP2BQ9UQN3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP2BQ9UQN3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP2BQ9UQN3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP2BQ9UQN3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP2BQ9UQN3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP2BQ9UQN3 AC073648.6-201ENST00000641589 218 ntBASIC18.94■□□□□ 0.62
CHMP2BQ9UQN3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP2BQ9UQN3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP2BQ9UQN3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.94■□□□□ 0.62
CHMP2BQ9UQN3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP2BQ9UQN3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP2BQ9UQN3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP2BQ9UQN3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CHMP2BQ9UQN3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CHMP2BQ9UQN3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.94■□□□□ 0.62
CHMP2BQ9UQN3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHMP2BQ9UQN3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP2BQ9UQN3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.93■□□□□ 0.62
CHMP2BQ9UQN3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP2BQ9UQN3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP2BQ9UQN3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.93■□□□□ 0.62
CHMP2BQ9UQN3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP2BQ9UQN3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP2BQ9UQN3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHMP2BQ9UQN3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms