Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 AL391807.1-203ENST00000604392 2365 ntBASIC19.96■□□□□ 0.79
UBQLN1Q9UMX0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBQLN1Q9UMX0 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBQLN1Q9UMX0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UBQLN1Q9UMX0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.96■□□□□ 0.79
UBQLN1Q9UMX0 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
UBQLN1Q9UMX0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBQLN1Q9UMX0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBQLN1Q9UMX0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBQLN1Q9UMX0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBQLN1Q9UMX0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
UBQLN1Q9UMX0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
UBQLN1Q9UMX0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBQLN1Q9UMX0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
UBQLN1Q9UMX0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBQLN1Q9UMX0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBQLN1Q9UMX0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.95■□□□□ 0.78
UBQLN1Q9UMX0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.95■□□□□ 0.78
UBQLN1Q9UMX0 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.95■□□□□ 0.78
UBQLN1Q9UMX0 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.95■□□□□ 0.78
UBQLN1Q9UMX0 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.95■□□□□ 0.78
UBQLN1Q9UMX0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.95■□□□□ 0.78
UBQLN1Q9UMX0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
UBQLN1Q9UMX0 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
UBQLN1Q9UMX0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBQLN1Q9UMX0 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
UBQLN1Q9UMX0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBQLN1Q9UMX0 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBQLN1Q9UMX0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBQLN1Q9UMX0 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBQLN1Q9UMX0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBQLN1Q9UMX0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.95■□□□□ 0.78
UBQLN1Q9UMX0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBQLN1Q9UMX0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
UBQLN1Q9UMX0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.94■□□□□ 0.78
UBQLN1Q9UMX0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
UBQLN1Q9UMX0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.94■□□□□ 0.78
UBQLN1Q9UMX0 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.94■□□□□ 0.78
UBQLN1Q9UMX0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
UBQLN1Q9UMX0 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBQLN1Q9UMX0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBQLN1Q9UMX0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.94■□□□□ 0.78
UBQLN1Q9UMX0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.94■□□□□ 0.78
UBQLN1Q9UMX0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.94■□□□□ 0.78
UBQLN1Q9UMX0 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
UBQLN1Q9UMX0 PVRIG2P-201ENST00000435460 978 ntBASIC19.94■□□□□ 0.78
UBQLN1Q9UMX0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBQLN1Q9UMX0 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.94■□□□□ 0.78
UBQLN1Q9UMX0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.94■□□□□ 0.78
UBQLN1Q9UMX0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
UBQLN1Q9UMX0 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBQLN1Q9UMX0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.94■□□□□ 0.78
UBQLN1Q9UMX0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.94■□□□□ 0.78
UBQLN1Q9UMX0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBQLN1Q9UMX0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBQLN1Q9UMX0 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBQLN1Q9UMX0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBQLN1Q9UMX0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBQLN1Q9UMX0 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.93■□□□□ 0.78
UBQLN1Q9UMX0 AC112777.1-201ENST00000540175 1423 ntBASIC19.93■□□□□ 0.78
UBQLN1Q9UMX0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBQLN1Q9UMX0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.93■□□□□ 0.78
UBQLN1Q9UMX0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBQLN1Q9UMX0 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBQLN1Q9UMX0 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.93■□□□□ 0.78
UBQLN1Q9UMX0 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBQLN1Q9UMX0 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.93■□□□□ 0.78
UBQLN1Q9UMX0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBQLN1Q9UMX0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBQLN1Q9UMX0 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBQLN1Q9UMX0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.93■□□□□ 0.78
UBQLN1Q9UMX0 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
UBQLN1Q9UMX0 AL645929.1-201ENST00000420084 975 ntBASIC19.93■□□□□ 0.78
UBQLN1Q9UMX0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBQLN1Q9UMX0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.93■□□□□ 0.78
UBQLN1Q9UMX0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.93■□□□□ 0.78
UBQLN1Q9UMX0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.93■□□□□ 0.78
UBQLN1Q9UMX0 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.93■□□□□ 0.78
UBQLN1Q9UMX0 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
UBQLN1Q9UMX0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBQLN1Q9UMX0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBQLN1Q9UMX0 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBQLN1Q9UMX0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBQLN1Q9UMX0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN1Q9UMX0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN1Q9UMX0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
UBQLN1Q9UMX0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
UBQLN1Q9UMX0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN1Q9UMX0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
UBQLN1Q9UMX0 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN1Q9UMX0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN1Q9UMX0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN1Q9UMX0 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN1Q9UMX0 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN1Q9UMX0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBQLN1Q9UMX0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.92■□□□□ 0.78
UBQLN1Q9UMX0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.92■□□□□ 0.78
UBQLN1Q9UMX0 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.92■□□□□ 0.78
UBQLN1Q9UMX0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
UBQLN1Q9UMX0 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms