Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SALL4Q9UJQ4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SALL4Q9UJQ4 PRSS44-201ENST00000515154 1146 ntBASIC19.8■□□□□ 0.76
SALL4Q9UJQ4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.8■□□□□ 0.76
SALL4Q9UJQ4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.8■□□□□ 0.76
SALL4Q9UJQ4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SALL4Q9UJQ4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.8■□□□□ 0.76
SALL4Q9UJQ4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SALL4Q9UJQ4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SALL4Q9UJQ4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SALL4Q9UJQ4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SALL4Q9UJQ4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SALL4Q9UJQ4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SALL4Q9UJQ4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.8■□□□□ 0.76
SALL4Q9UJQ4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SALL4Q9UJQ4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.79■□□□□ 0.76
SALL4Q9UJQ4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.79■□□□□ 0.76
SALL4Q9UJQ4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SALL4Q9UJQ4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SALL4Q9UJQ4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SALL4Q9UJQ4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.79■□□□□ 0.76
SALL4Q9UJQ4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.79■□□□□ 0.76
SALL4Q9UJQ4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SALL4Q9UJQ4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SALL4Q9UJQ4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SALL4Q9UJQ4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
SALL4Q9UJQ4 NIFKP9-201ENST00000419265 221 ntBASIC19.79■□□□□ 0.76
SALL4Q9UJQ4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.79■□□□□ 0.76
SALL4Q9UJQ4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.79■□□□□ 0.76
SALL4Q9UJQ4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SALL4Q9UJQ4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SALL4Q9UJQ4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.79■□□□□ 0.76
SALL4Q9UJQ4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.79■□□□□ 0.76
SALL4Q9UJQ4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.79■□□□□ 0.76
SALL4Q9UJQ4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SALL4Q9UJQ4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SALL4Q9UJQ4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SALL4Q9UJQ4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SALL4Q9UJQ4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SALL4Q9UJQ4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SALL4Q9UJQ4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SALL4Q9UJQ4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SALL4Q9UJQ4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.78■□□□□ 0.76
SALL4Q9UJQ4 AC112777.1-201ENST00000540175 1423 ntBASIC19.78■□□□□ 0.76
SALL4Q9UJQ4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SALL4Q9UJQ4 AC134043.2-201ENST00000624206 2238 ntBASIC19.78■□□□□ 0.76
SALL4Q9UJQ4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SALL4Q9UJQ4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SALL4Q9UJQ4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SALL4Q9UJQ4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SALL4Q9UJQ4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SALL4Q9UJQ4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SALL4Q9UJQ4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SALL4Q9UJQ4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SALL4Q9UJQ4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.78■□□□□ 0.76
SALL4Q9UJQ4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.78■□□□□ 0.76
SALL4Q9UJQ4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.78■□□□□ 0.76
SALL4Q9UJQ4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.78■□□□□ 0.76
SALL4Q9UJQ4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.78■□□□□ 0.76
SALL4Q9UJQ4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SALL4Q9UJQ4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.78■□□□□ 0.76
SALL4Q9UJQ4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SALL4Q9UJQ4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SALL4Q9UJQ4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SALL4Q9UJQ4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SALL4Q9UJQ4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SALL4Q9UJQ4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
SALL4Q9UJQ4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SALL4Q9UJQ4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SALL4Q9UJQ4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SALL4Q9UJQ4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SALL4Q9UJQ4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SALL4Q9UJQ4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SALL4Q9UJQ4 RCC2P3-201ENST00000418112 1537 ntBASIC19.77■□□□□ 0.76
SALL4Q9UJQ4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
SALL4Q9UJQ4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.77■□□□□ 0.76
SALL4Q9UJQ4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.77■□□□□ 0.76
SALL4Q9UJQ4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.77■□□□□ 0.76
SALL4Q9UJQ4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SALL4Q9UJQ4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SALL4Q9UJQ4 AC012618.2-201ENST00000428058 849 ntBASIC19.77■□□□□ 0.76
SALL4Q9UJQ4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SALL4Q9UJQ4 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.77■□□□□ 0.76
SALL4Q9UJQ4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.77■□□□□ 0.76
SALL4Q9UJQ4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.77■□□□□ 0.76
SALL4Q9UJQ4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.77■□□□□ 0.76
SALL4Q9UJQ4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.77■□□□□ 0.76
SALL4Q9UJQ4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.77■□□□□ 0.76
SALL4Q9UJQ4 AC131212.4-201ENST00000623606 975 ntBASIC19.77■□□□□ 0.76
SALL4Q9UJQ4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SALL4Q9UJQ4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SALL4Q9UJQ4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SALL4Q9UJQ4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SALL4Q9UJQ4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.77■□□□□ 0.76
SALL4Q9UJQ4 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.77■□□□□ 0.76
SALL4Q9UJQ4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
SALL4Q9UJQ4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
SALL4Q9UJQ4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
SALL4Q9UJQ4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
SALL4Q9UJQ4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms