Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.83■□□□□ 0.6
NCKIPSDQ9NZQ3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NCKIPSDQ9NZQ3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
NCKIPSDQ9NZQ3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NCKIPSDQ9NZQ3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NCKIPSDQ9NZQ3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NCKIPSDQ9NZQ3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.83■□□□□ 0.6
NCKIPSDQ9NZQ3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NCKIPSDQ9NZQ3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.83■□□□□ 0.6
NCKIPSDQ9NZQ3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NCKIPSDQ9NZQ3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NCKIPSDQ9NZQ3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NCKIPSDQ9NZQ3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NCKIPSDQ9NZQ3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.83■□□□□ 0.6
NCKIPSDQ9NZQ3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.83■□□□□ 0.6
NCKIPSDQ9NZQ3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.82■□□□□ 0.6
NCKIPSDQ9NZQ3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
NCKIPSDQ9NZQ3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCKIPSDQ9NZQ3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.82■□□□□ 0.6
NCKIPSDQ9NZQ3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.82■□□□□ 0.6
NCKIPSDQ9NZQ3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCKIPSDQ9NZQ3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
NCKIPSDQ9NZQ3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.82■□□□□ 0.6
NCKIPSDQ9NZQ3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCKIPSDQ9NZQ3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCKIPSDQ9NZQ3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCKIPSDQ9NZQ3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCKIPSDQ9NZQ3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCKIPSDQ9NZQ3 AC007663.1-201ENST00000438948 1240 ntBASIC18.82■□□□□ 0.6
NCKIPSDQ9NZQ3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.82■□□□□ 0.6
NCKIPSDQ9NZQ3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NCKIPSDQ9NZQ3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCKIPSDQ9NZQ3 AC091076.1-201ENST00000610741 619 ntBASIC18.82■□□□□ 0.6
NCKIPSDQ9NZQ3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.82■□□□□ 0.6
NCKIPSDQ9NZQ3 WIZP1-201ENST00000531444 2299 ntBASIC18.82■□□□□ 0.6
NCKIPSDQ9NZQ3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCKIPSDQ9NZQ3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
NCKIPSDQ9NZQ3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCKIPSDQ9NZQ3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NCKIPSDQ9NZQ3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NCKIPSDQ9NZQ3 AC092338.2-201ENST00000568827 1415 ntBASIC18.82■□□□□ 0.6
NCKIPSDQ9NZQ3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.82■□□□□ 0.6
NCKIPSDQ9NZQ3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.82■□□□□ 0.6
NCKIPSDQ9NZQ3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NCKIPSDQ9NZQ3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.82■□□□□ 0.6
NCKIPSDQ9NZQ3 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.81■□□□□ 0.6
NCKIPSDQ9NZQ3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKIPSDQ9NZQ3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NCKIPSDQ9NZQ3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKIPSDQ9NZQ3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NCKIPSDQ9NZQ3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.81■□□□□ 0.6
NCKIPSDQ9NZQ3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKIPSDQ9NZQ3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKIPSDQ9NZQ3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.81■□□□□ 0.6
NCKIPSDQ9NZQ3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKIPSDQ9NZQ3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKIPSDQ9NZQ3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKIPSDQ9NZQ3 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.81■□□□□ 0.6
NCKIPSDQ9NZQ3 FAM8A6P-201ENST00000407496 1135 ntBASIC18.81■□□□□ 0.6
NCKIPSDQ9NZQ3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
NCKIPSDQ9NZQ3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.81■□□□□ 0.6
NCKIPSDQ9NZQ3 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.81■□□□□ 0.6
NCKIPSDQ9NZQ3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
NCKIPSDQ9NZQ3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
NCKIPSDQ9NZQ3 AL138966.2-201ENST00000621997 464 ntBASIC18.81■□□□□ 0.6
NCKIPSDQ9NZQ3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.81■□□□□ 0.6
NCKIPSDQ9NZQ3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.81■□□□□ 0.6
NCKIPSDQ9NZQ3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKIPSDQ9NZQ3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKIPSDQ9NZQ3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKIPSDQ9NZQ3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NCKIPSDQ9NZQ3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.81■□□□□ 0.6
NCKIPSDQ9NZQ3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.81■□□□□ 0.6
NCKIPSDQ9NZQ3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NCKIPSDQ9NZQ3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NCKIPSDQ9NZQ3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NCKIPSDQ9NZQ3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 FEM1AP3-201ENST00000403722 1741 ntBASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 INGX-201ENST00000359239 846 ntBASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 COX11P1-201ENST00000489116 835 ntBASIC18.8■□□□□ 0.6
NCKIPSDQ9NZQ3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms