Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
VPS45Q9NRW7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS45Q9NRW7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
VPS45Q9NRW7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.21■□□□□ 0.67
VPS45Q9NRW7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS45Q9NRW7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS45Q9NRW7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS45Q9NRW7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS45Q9NRW7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VPS45Q9NRW7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.21■□□□□ 0.67
VPS45Q9NRW7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VPS45Q9NRW7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS45Q9NRW7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VPS45Q9NRW7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.21■□□□□ 0.67
VPS45Q9NRW7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.21■□□□□ 0.67
VPS45Q9NRW7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.21■□□□□ 0.67
VPS45Q9NRW7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.21■□□□□ 0.67
VPS45Q9NRW7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.21■□□□□ 0.67
VPS45Q9NRW7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS45Q9NRW7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VPS45Q9NRW7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.21■□□□□ 0.67
VPS45Q9NRW7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VPS45Q9NRW7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VPS45Q9NRW7 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VPS45Q9NRW7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VPS45Q9NRW7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VPS45Q9NRW7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VPS45Q9NRW7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
VPS45Q9NRW7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VPS45Q9NRW7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.2■□□□□ 0.66
VPS45Q9NRW7 KRT8P3-201ENST00000519669 1449 ntBASIC19.2■□□□□ 0.66
VPS45Q9NRW7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VPS45Q9NRW7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.2■□□□□ 0.66
VPS45Q9NRW7 AP000523.1-201ENST00000398242 1049 ntBASIC19.2■□□□□ 0.66
VPS45Q9NRW7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.2■□□□□ 0.66
VPS45Q9NRW7 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.2■□□□□ 0.66
VPS45Q9NRW7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.2■□□□□ 0.66
VPS45Q9NRW7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.2■□□□□ 0.66
VPS45Q9NRW7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.2■□□□□ 0.66
VPS45Q9NRW7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VPS45Q9NRW7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.2■□□□□ 0.66
VPS45Q9NRW7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.2■□□□□ 0.66
VPS45Q9NRW7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VPS45Q9NRW7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.2■□□□□ 0.66
VPS45Q9NRW7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VPS45Q9NRW7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VPS45Q9NRW7 AC120498.9-201ENST00000339021 3867 ntBASIC19.2■□□□□ 0.66
VPS45Q9NRW7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
VPS45Q9NRW7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VPS45Q9NRW7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VPS45Q9NRW7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS45Q9NRW7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VPS45Q9NRW7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS45Q9NRW7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
VPS45Q9NRW7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VPS45Q9NRW7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VPS45Q9NRW7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS45Q9NRW7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS45Q9NRW7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
VPS45Q9NRW7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS45Q9NRW7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
VPS45Q9NRW7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VPS45Q9NRW7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS45Q9NRW7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VPS45Q9NRW7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS45Q9NRW7 AC083906.6-201ENST00000641366 219 ntBASIC19.19■□□□□ 0.66
VPS45Q9NRW7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
VPS45Q9NRW7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.19■□□□□ 0.66
VPS45Q9NRW7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VPS45Q9NRW7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
VPS45Q9NRW7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.19■□□□□ 0.66
VPS45Q9NRW7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS45Q9NRW7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
VPS45Q9NRW7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
VPS45Q9NRW7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.19■□□□□ 0.66
VPS45Q9NRW7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
VPS45Q9NRW7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS45Q9NRW7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VPS45Q9NRW7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS45Q9NRW7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS45Q9NRW7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS45Q9NRW7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS45Q9NRW7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.18■□□□□ 0.66
VPS45Q9NRW7 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS45Q9NRW7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VPS45Q9NRW7 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS45Q9NRW7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VPS45Q9NRW7 KRT18P38-201ENST00000449496 1282 ntBASIC19.18■□□□□ 0.66
VPS45Q9NRW7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.18■□□□□ 0.66
VPS45Q9NRW7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.18■□□□□ 0.66
VPS45Q9NRW7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.18■□□□□ 0.66
VPS45Q9NRW7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
VPS45Q9NRW7 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VPS45Q9NRW7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.18■□□□□ 0.66
VPS45Q9NRW7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VPS45Q9NRW7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
VPS45Q9NRW7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.18■□□□□ 0.66
VPS45Q9NRW7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS45Q9NRW7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS45Q9NRW7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms