Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTPS2Q9NRF8 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTPS2Q9NRF8 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTPS2Q9NRF8 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTPS2Q9NRF8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTPS2Q9NRF8 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTPS2Q9NRF8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.34■□□□□ 0.37
CTPS2Q9NRF8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CTPS2Q9NRF8 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTPS2Q9NRF8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.34■□□□□ 0.37
CTPS2Q9NRF8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.34■□□□□ 0.37
CTPS2Q9NRF8 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.34■□□□□ 0.37
CTPS2Q9NRF8 RCC2P6-201ENST00000526625 1557 ntBASIC17.34■□□□□ 0.37
CTPS2Q9NRF8 AC233702.5-201ENST00000584107 538 ntBASIC17.34■□□□□ 0.37
CTPS2Q9NRF8 Z99916.2-201ENST00000604037 246 ntBASIC17.34■□□□□ 0.37
CTPS2Q9NRF8 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.34■□□□□ 0.37
CTPS2Q9NRF8 AC113410.3-201ENST00000623366 203 ntBASIC17.34■□□□□ 0.37
CTPS2Q9NRF8 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTPS2Q9NRF8 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTPS2Q9NRF8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTPS2Q9NRF8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTPS2Q9NRF8 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTPS2Q9NRF8 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
CTPS2Q9NRF8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CTPS2Q9NRF8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CTPS2Q9NRF8 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTPS2Q9NRF8 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTPS2Q9NRF8 KRT8P11-201ENST00000409686 1436 ntBASIC17.33■□□□□ 0.36
CTPS2Q9NRF8 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.33■□□□□ 0.36
CTPS2Q9NRF8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.33■□□□□ 0.36
CTPS2Q9NRF8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTPS2Q9NRF8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.33■□□□□ 0.36
CTPS2Q9NRF8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTPS2Q9NRF8 AC008550.1-201ENST00000511500 884 ntBASIC17.33■□□□□ 0.36
CTPS2Q9NRF8 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.33■□□□□ 0.36
CTPS2Q9NRF8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CTPS2Q9NRF8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.33■□□□□ 0.36
CTPS2Q9NRF8 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CTPS2Q9NRF8 AP001412.1-201ENST00000608405 714 ntBASIC17.33■□□□□ 0.36
CTPS2Q9NRF8 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.33■□□□□ 0.36
CTPS2Q9NRF8 AL049637.2-201ENST00000641778 930 ntBASIC17.33■□□□□ 0.36
CTPS2Q9NRF8 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CTPS2Q9NRF8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CTPS2Q9NRF8 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.33■□□□□ 0.36
CTPS2Q9NRF8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTPS2Q9NRF8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTPS2Q9NRF8 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTPS2Q9NRF8 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTPS2Q9NRF8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.32■□□□□ 0.36
CTPS2Q9NRF8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.32■□□□□ 0.36
CTPS2Q9NRF8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTPS2Q9NRF8 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.32■□□□□ 0.36
CTPS2Q9NRF8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.32■□□□□ 0.36
CTPS2Q9NRF8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.32■□□□□ 0.36
CTPS2Q9NRF8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTPS2Q9NRF8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTPS2Q9NRF8 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CTPS2Q9NRF8 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTPS2Q9NRF8 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTPS2Q9NRF8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTPS2Q9NRF8 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CTPS2Q9NRF8 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CTPS2Q9NRF8 AC004951.3-201ENST00000418645 1148 ntBASIC17.32■□□□□ 0.36
CTPS2Q9NRF8 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.32■□□□□ 0.36
CTPS2Q9NRF8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.32■□□□□ 0.36
CTPS2Q9NRF8 AC091390.4-202ENST00000476426 537 ntBASIC17.32■□□□□ 0.36
CTPS2Q9NRF8 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTPS2Q9NRF8 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTPS2Q9NRF8 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.32■□□□□ 0.36
CTPS2Q9NRF8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.32■□□□□ 0.36
CTPS2Q9NRF8 AC026271.3-201ENST00000571884 352 ntBASIC17.32■□□□□ 0.36
CTPS2Q9NRF8 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.32■□□□□ 0.36
CTPS2Q9NRF8 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTPS2Q9NRF8 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CTPS2Q9NRF8 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.32■□□□□ 0.36
CTPS2Q9NRF8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTPS2Q9NRF8 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTPS2Q9NRF8 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTPS2Q9NRF8 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTPS2Q9NRF8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.31■□□□□ 0.36
CTPS2Q9NRF8 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTPS2Q9NRF8 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.31■□□□□ 0.36
CTPS2Q9NRF8 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTPS2Q9NRF8 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.31■□□□□ 0.36
CTPS2Q9NRF8 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
CTPS2Q9NRF8 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTPS2Q9NRF8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTPS2Q9NRF8 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTPS2Q9NRF8 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTPS2Q9NRF8 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTPS2Q9NRF8 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.31■□□□□ 0.36
CTPS2Q9NRF8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTPS2Q9NRF8 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.31■□□□□ 0.36
CTPS2Q9NRF8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.31■□□□□ 0.36
CTPS2Q9NRF8 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTPS2Q9NRF8 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTPS2Q9NRF8 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTPS2Q9NRF8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.31■□□□□ 0.36
CTPS2Q9NRF8 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTPS2Q9NRF8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms