Protein–RNA interactions for Protein: Q9NR80

ARHGEF4, Rho guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4Q9NR80 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ARHGEF4Q9NR80 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF4Q9NR80 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF4Q9NR80 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF4Q9NR80 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
ARHGEF4Q9NR80 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF4Q9NR80 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF4Q9NR80 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF4Q9NR80 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
ARHGEF4Q9NR80 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF4Q9NR80 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF4Q9NR80 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF4Q9NR80 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF4Q9NR80 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.49■□□□□ 0.71
ARHGEF4Q9NR80 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF4Q9NR80 AP000523.1-201ENST00000398242 1049 ntBASIC19.49■□□□□ 0.71
ARHGEF4Q9NR80 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.49■□□□□ 0.71
ARHGEF4Q9NR80 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.49■□□□□ 0.71
ARHGEF4Q9NR80 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.49■□□□□ 0.71
ARHGEF4Q9NR80 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.49■□□□□ 0.71
ARHGEF4Q9NR80 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.49■□□□□ 0.71
ARHGEF4Q9NR80 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.49■□□□□ 0.71
ARHGEF4Q9NR80 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
ARHGEF4Q9NR80 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF4Q9NR80 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF4Q9NR80 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ARHGEF4Q9NR80 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
ARHGEF4Q9NR80 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.49■□□□□ 0.71
ARHGEF4Q9NR80 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ARHGEF4Q9NR80 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ARHGEF4Q9NR80 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ARHGEF4Q9NR80 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.48■□□□□ 0.71
ARHGEF4Q9NR80 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.48■□□□□ 0.71
ARHGEF4Q9NR80 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ARHGEF4Q9NR80 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.48■□□□□ 0.71
ARHGEF4Q9NR80 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ARHGEF4Q9NR80 AC009947.2-201ENST00000444014 672 ntBASIC19.48■□□□□ 0.71
ARHGEF4Q9NR80 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.48■□□□□ 0.71
ARHGEF4Q9NR80 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.48■□□□□ 0.71
ARHGEF4Q9NR80 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.48■□□□□ 0.71
ARHGEF4Q9NR80 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.48■□□□□ 0.71
ARHGEF4Q9NR80 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.48■□□□□ 0.71
ARHGEF4Q9NR80 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ARHGEF4Q9NR80 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.48■□□□□ 0.71
ARHGEF4Q9NR80 AL121956.5-201ENST00000625261 221 ntBASIC19.48■□□□□ 0.71
ARHGEF4Q9NR80 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ARHGEF4Q9NR80 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ARHGEF4Q9NR80 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.48■□□□□ 0.71
ARHGEF4Q9NR80 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ARHGEF4Q9NR80 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ARHGEF4Q9NR80 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
ARHGEF4Q9NR80 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ARHGEF4Q9NR80 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.48■□□□□ 0.71
ARHGEF4Q9NR80 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
ARHGEF4Q9NR80 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ARHGEF4Q9NR80 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.47■□□□□ 0.71
ARHGEF4Q9NR80 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
ARHGEF4Q9NR80 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
ARHGEF4Q9NR80 AL671277.2-201ENST00000458060 996 ntBASIC19.47■□□□□ 0.71
ARHGEF4Q9NR80 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ARHGEF4Q9NR80 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.47■□□□□ 0.71
ARHGEF4Q9NR80 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.47■□□□□ 0.71
ARHGEF4Q9NR80 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.47■□□□□ 0.71
ARHGEF4Q9NR80 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.47■□□□□ 0.71
ARHGEF4Q9NR80 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.47■□□□□ 0.71
ARHGEF4Q9NR80 AC008622.2-201ENST00000617006 1229 ntBASIC19.47■□□□□ 0.71
ARHGEF4Q9NR80 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.47■□□□□ 0.71
ARHGEF4Q9NR80 AP000550.4-202ENST00000639755 178 ntBASIC19.47■□□□□ 0.71
ARHGEF4Q9NR80 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ARHGEF4Q9NR80 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.47■□□□□ 0.71
ARHGEF4Q9NR80 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.47■□□□□ 0.71
ARHGEF4Q9NR80 KRT8P32-201ENST00000512863 1461 ntBASIC19.47■□□□□ 0.71
ARHGEF4Q9NR80 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ARHGEF4Q9NR80 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.46■□□□□ 0.71
ARHGEF4Q9NR80 AL138781.2-201ENST00000617896 1843 ntBASIC19.46■□□□□ 0.71
ARHGEF4Q9NR80 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ARHGEF4Q9NR80 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ARHGEF4Q9NR80 HEIH-201ENST00000623091 1652 ntBASIC19.46■□□□□ 0.71
ARHGEF4Q9NR80 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ARHGEF4Q9NR80 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ARHGEF4Q9NR80 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ARHGEF4Q9NR80 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ARHGEF4Q9NR80 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
ARHGEF4Q9NR80 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ARHGEF4Q9NR80 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.46■□□□□ 0.71
ARHGEF4Q9NR80 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.46■□□□□ 0.71
ARHGEF4Q9NR80 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ARHGEF4Q9NR80 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ARHGEF4Q9NR80 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ARHGEF4Q9NR80 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms