Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.56■■□□□ 1.04
VAT1LQ9HCJ6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.56■■□□□ 1.04
VAT1LQ9HCJ6 AC034236.2-201ENST00000606662 1610 ntBASIC21.56■■□□□ 1.04
VAT1LQ9HCJ6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VAT1LQ9HCJ6 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VAT1LQ9HCJ6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.56■■□□□ 1.04
VAT1LQ9HCJ6 STARP1-201ENST00000397973 869 ntBASIC21.56■■□□□ 1.04
VAT1LQ9HCJ6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VAT1LQ9HCJ6 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.56■■□□□ 1.04
VAT1LQ9HCJ6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.56■■□□□ 1.04
VAT1LQ9HCJ6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
VAT1LQ9HCJ6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.56■■□□□ 1.04
VAT1LQ9HCJ6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.56■■□□□ 1.04
VAT1LQ9HCJ6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.56■■□□□ 1.04
VAT1LQ9HCJ6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.56■■□□□ 1.04
VAT1LQ9HCJ6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VAT1LQ9HCJ6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VAT1LQ9HCJ6 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VAT1LQ9HCJ6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VAT1LQ9HCJ6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
VAT1LQ9HCJ6 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.56■■□□□ 1.04
VAT1LQ9HCJ6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
VAT1LQ9HCJ6 AC099343.3-201ENST00000605834 2503 ntBASIC21.56■■□□□ 1.04
VAT1LQ9HCJ6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VAT1LQ9HCJ6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
VAT1LQ9HCJ6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
VAT1LQ9HCJ6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VAT1LQ9HCJ6 AL671277.2-201ENST00000458060 996 ntBASIC21.55■■□□□ 1.04
VAT1LQ9HCJ6 RASA4DP-201ENST00000460726 1199 ntBASIC21.55■■□□□ 1.04
VAT1LQ9HCJ6 AC092597.1-201ENST00000487352 616 ntBASIC21.55■■□□□ 1.04
VAT1LQ9HCJ6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VAT1LQ9HCJ6 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
VAT1LQ9HCJ6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
VAT1LQ9HCJ6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.55■■□□□ 1.04
VAT1LQ9HCJ6 AL157888.1-201ENST00000631930 593 ntBASIC21.55■■□□□ 1.04
VAT1LQ9HCJ6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
VAT1LQ9HCJ6 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.55■■□□□ 1.04
VAT1LQ9HCJ6 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.55■■□□□ 1.04
VAT1LQ9HCJ6 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
VAT1LQ9HCJ6 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
VAT1LQ9HCJ6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VAT1LQ9HCJ6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
VAT1LQ9HCJ6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VAT1LQ9HCJ6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
VAT1LQ9HCJ6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.54■■□□□ 1.04
VAT1LQ9HCJ6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
VAT1LQ9HCJ6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.54■■□□□ 1.04
VAT1LQ9HCJ6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
VAT1LQ9HCJ6 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VAT1LQ9HCJ6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.54■■□□□ 1.04
VAT1LQ9HCJ6 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VAT1LQ9HCJ6 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VAT1LQ9HCJ6 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
VAT1LQ9HCJ6 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.54■■□□□ 1.04
VAT1LQ9HCJ6 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VAT1LQ9HCJ6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.54■■□□□ 1.04
VAT1LQ9HCJ6 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VAT1LQ9HCJ6 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VAT1LQ9HCJ6 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VAT1LQ9HCJ6 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VAT1LQ9HCJ6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
VAT1LQ9HCJ6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
VAT1LQ9HCJ6 AC020763.4-201ENST00000623414 4170 ntBASIC21.54■■□□□ 1.04
VAT1LQ9HCJ6 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.54■■□□□ 1.04
VAT1LQ9HCJ6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VAT1LQ9HCJ6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.54■■□□□ 1.04
VAT1LQ9HCJ6 AP000974.1-201ENST00000623909 2387 ntBASIC21.54■■□□□ 1.04
VAT1LQ9HCJ6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.54■■□□□ 1.04
VAT1LQ9HCJ6 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VAT1LQ9HCJ6 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
VAT1LQ9HCJ6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
VAT1LQ9HCJ6 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
VAT1LQ9HCJ6 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
VAT1LQ9HCJ6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
VAT1LQ9HCJ6 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.53■■□□□ 1.04
VAT1LQ9HCJ6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VAT1LQ9HCJ6 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VAT1LQ9HCJ6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
VAT1LQ9HCJ6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VAT1LQ9HCJ6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VAT1LQ9HCJ6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VAT1LQ9HCJ6 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
VAT1LQ9HCJ6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VAT1LQ9HCJ6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.53■■□□□ 1.04
VAT1LQ9HCJ6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VAT1LQ9HCJ6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.53■■□□□ 1.04
VAT1LQ9HCJ6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
VAT1LQ9HCJ6 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VAT1LQ9HCJ6 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VAT1LQ9HCJ6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VAT1LQ9HCJ6 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
VAT1LQ9HCJ6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VAT1LQ9HCJ6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VAT1LQ9HCJ6 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.52■■□□□ 1.04
VAT1LQ9HCJ6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
VAT1LQ9HCJ6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VAT1LQ9HCJ6 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
VAT1LQ9HCJ6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
VAT1LQ9HCJ6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.52■■□□□ 1.04
VAT1LQ9HCJ6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms