Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIPK3Q9H422 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HIPK3Q9H422 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIPK3Q9H422 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIPK3Q9H422 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIPK3Q9H422 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIPK3Q9H422 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
HIPK3Q9H422 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HIPK3Q9H422 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
HIPK3Q9H422 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIPK3Q9H422 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIPK3Q9H422 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIPK3Q9H422 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.31■□□□□ 0.84
HIPK3Q9H422 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIPK3Q9H422 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HIPK3Q9H422 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HIPK3Q9H422 AF186996.4-201ENST00000467186 377 ntBASIC20.31■□□□□ 0.84
HIPK3Q9H422 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIPK3Q9H422 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.31■□□□□ 0.84
HIPK3Q9H422 KRT18P58-201ENST00000527480 1120 ntBASIC20.31■□□□□ 0.84
HIPK3Q9H422 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.31■□□□□ 0.84
HIPK3Q9H422 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.31■□□□□ 0.84
HIPK3Q9H422 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.31■□□□□ 0.84
HIPK3Q9H422 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIPK3Q9H422 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIPK3Q9H422 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIPK3Q9H422 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
HIPK3Q9H422 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.31■□□□□ 0.84
HIPK3Q9H422 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIPK3Q9H422 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIPK3Q9H422 KRT89P-201ENST00000620027 1478 ntBASIC20.3■□□□□ 0.84
HIPK3Q9H422 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.3■□□□□ 0.84
HIPK3Q9H422 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.3■□□□□ 0.84
HIPK3Q9H422 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.3■□□□□ 0.84
HIPK3Q9H422 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIPK3Q9H422 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HIPK3Q9H422 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.3■□□□□ 0.84
HIPK3Q9H422 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIPK3Q9H422 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIPK3Q9H422 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
HIPK3Q9H422 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
HIPK3Q9H422 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIPK3Q9H422 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIPK3Q9H422 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
HIPK3Q9H422 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
HIPK3Q9H422 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.3■□□□□ 0.84
HIPK3Q9H422 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.3■□□□□ 0.84
HIPK3Q9H422 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.3■□□□□ 0.84
HIPK3Q9H422 AC009065.1-201ENST00000564055 1225 ntBASIC20.3■□□□□ 0.84
HIPK3Q9H422 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.3■□□□□ 0.84
HIPK3Q9H422 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.3■□□□□ 0.84
HIPK3Q9H422 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.3■□□□□ 0.84
HIPK3Q9H422 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIPK3Q9H422 AL591684.3-201ENST00000605187 298 ntBASIC20.3■□□□□ 0.84
HIPK3Q9H422 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
HIPK3Q9H422 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
HIPK3Q9H422 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.3■□□□□ 0.84
HIPK3Q9H422 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HIPK3Q9H422 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.3■□□□□ 0.84
HIPK3Q9H422 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.29■□□□□ 0.84
HIPK3Q9H422 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HIPK3Q9H422 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.29■□□□□ 0.84
HIPK3Q9H422 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.29■□□□□ 0.84
HIPK3Q9H422 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HIPK3Q9H422 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HIPK3Q9H422 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.29■□□□□ 0.84
HIPK3Q9H422 AC093909.1-201ENST00000504731 1122 ntBASIC20.29■□□□□ 0.84
HIPK3Q9H422 AC092865.5-201ENST00000545435 363 ntBASIC20.29■□□□□ 0.84
HIPK3Q9H422 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.29■□□□□ 0.84
HIPK3Q9H422 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.29■□□□□ 0.84
HIPK3Q9H422 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.29■□□□□ 0.84
HIPK3Q9H422 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
HIPK3Q9H422 AC112907.3-201ENST00000577781 2400 ntBASIC20.29■□□□□ 0.84
HIPK3Q9H422 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
HIPK3Q9H422 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HIPK3Q9H422 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HIPK3Q9H422 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.29■□□□□ 0.84
HIPK3Q9H422 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HIPK3Q9H422 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.29■□□□□ 0.84
HIPK3Q9H422 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
HIPK3Q9H422 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HIPK3Q9H422 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HIPK3Q9H422 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HIPK3Q9H422 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
HIPK3Q9H422 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HIPK3Q9H422 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
HIPK3Q9H422 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HIPK3Q9H422 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
HIPK3Q9H422 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.28■□□□□ 0.84
HIPK3Q9H422 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HIPK3Q9H422 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.28■□□□□ 0.84
HIPK3Q9H422 BNIP3P18-201ENST00000593976 575 ntBASIC20.28■□□□□ 0.84
HIPK3Q9H422 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.28■□□□□ 0.84
HIPK3Q9H422 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.28■□□□□ 0.84
HIPK3Q9H422 AC148477.8-201ENST00000624298 468 ntBASIC20.28■□□□□ 0.84
HIPK3Q9H422 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HIPK3Q9H422 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HIPK3Q9H422 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HIPK3Q9H422 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
HIPK3Q9H422 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms