Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF38Q9H0F5 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF38Q9H0F5 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF38Q9H0F5 KRT8P50-201ENST00000562022 1438 ntBASIC19.26■□□□□ 0.67
RNF38Q9H0F5 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF38Q9H0F5 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF38Q9H0F5 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF38Q9H0F5 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF38Q9H0F5 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF38Q9H0F5 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF38Q9H0F5 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF38Q9H0F5 MIR3180-4-201ENST00000582223 153 ntBASIC19.26■□□□□ 0.67
RNF38Q9H0F5 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF38Q9H0F5 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF38Q9H0F5 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF38Q9H0F5 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF38Q9H0F5 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF38Q9H0F5 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF38Q9H0F5 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF38Q9H0F5 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF38Q9H0F5 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF38Q9H0F5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF38Q9H0F5 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 KRT18P48-201ENST00000434763 852 ntBASIC19.25■□□□□ 0.67
RNF38Q9H0F5 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 BX276092.5-203ENST00000456199 560 ntBASIC19.25■□□□□ 0.67
RNF38Q9H0F5 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 AC092119.3-201ENST00000612618 583 ntBASIC19.25■□□□□ 0.67
RNF38Q9H0F5 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RNF38Q9H0F5 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF38Q9H0F5 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF38Q9H0F5 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF38Q9H0F5 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF38Q9H0F5 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF38Q9H0F5 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF38Q9H0F5 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF38Q9H0F5 AC093525.10-201ENST00000625130 1569 ntBASIC19.24■□□□□ 0.67
RNF38Q9H0F5 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF38Q9H0F5 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF38Q9H0F5 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RNF38Q9H0F5 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF38Q9H0F5 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF38Q9H0F5 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RNF38Q9H0F5 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF38Q9H0F5 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF38Q9H0F5 DUSP5P1-201ENST00000441325 1139 ntBASIC19.24■□□□□ 0.67
RNF38Q9H0F5 AP002383.4-201ENST00000442518 975 ntBASIC19.24■□□□□ 0.67
RNF38Q9H0F5 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.24■□□□□ 0.67
RNF38Q9H0F5 TSSC2-201ENST00000450217 709 ntBASIC19.24■□□□□ 0.67
RNF38Q9H0F5 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF38Q9H0F5 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF38Q9H0F5 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.24■□□□□ 0.67
RNF38Q9H0F5 AL121672.3-201ENST00000608644 468 ntBASIC19.24■□□□□ 0.67
RNF38Q9H0F5 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF38Q9H0F5 AC083906.6-201ENST00000641366 219 ntBASIC19.24■□□□□ 0.67
RNF38Q9H0F5 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF38Q9H0F5 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RNF38Q9H0F5 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF38Q9H0F5 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF38Q9H0F5 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.24■□□□□ 0.67
RNF38Q9H0F5 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF38Q9H0F5 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RNF38Q9H0F5 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms