Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC5.03□□□□□ -1.6
LCE3DQ9BYE3 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC5.03□□□□□ -1.61
LCE3DQ9BYE3 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.61
LCE3DQ9BYE3 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 AC018553.1-201ENST00000616682 1458 ntBASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC5.02□□□□□ -1.61
LCE3DQ9BYE3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms