Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFAF3Q9BU61 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 AC008764.6-201ENST00000595909 2069 ntBASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 GATS-209ENST00000454084 1030 ntTSL 3 BASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 AL031963.3-201ENST00000606441 850 ntBASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 KRT8P20-201ENST00000423953 1409 ntBASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 KRT8P17-201ENST00000453110 1448 ntBASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 AC009237.14-201ENST00000609975 1594 ntBASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.37□□□□□ -0.11
NDUFAF3Q9BU61 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 AP001271.2-201ENST00000624018 1556 ntBASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NDUFAF3Q9BU61 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 GCK-205ENST00000437084 1385 ntTSL 5 BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NDUFAF3Q9BU61 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms