Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
NEK1Q96PY6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC22.02■■□□□ 1.12
NEK1Q96PY6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC22.02■■□□□ 1.12
NEK1Q96PY6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
NEK1Q96PY6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
NEK1Q96PY6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
NEK1Q96PY6 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC22.02■■□□□ 1.12
NEK1Q96PY6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC22.02■■□□□ 1.12
NEK1Q96PY6 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
NEK1Q96PY6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC22.02■■□□□ 1.12
NEK1Q96PY6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC22.02■■□□□ 1.12
NEK1Q96PY6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
NEK1Q96PY6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
NEK1Q96PY6 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
NEK1Q96PY6 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NEK1Q96PY6 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
NEK1Q96PY6 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
NEK1Q96PY6 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC22.01■■□□□ 1.11
NEK1Q96PY6 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NEK1Q96PY6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC22.01■■□□□ 1.11
NEK1Q96PY6 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NEK1Q96PY6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC22.01■■□□□ 1.11
NEK1Q96PY6 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NEK1Q96PY6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
NEK1Q96PY6 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
NEK1Q96PY6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC22.01■■□□□ 1.11
NEK1Q96PY6 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
NEK1Q96PY6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC22.01■■□□□ 1.11
NEK1Q96PY6 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC22.01■■□□□ 1.11
NEK1Q96PY6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC22.01■■□□□ 1.11
NEK1Q96PY6 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NEK1Q96PY6 GXYLT1P6-201ENST00000456472 1187 ntBASIC22.01■■□□□ 1.11
NEK1Q96PY6 AC128688.1-201ENST00000487626 519 ntBASIC22.01■■□□□ 1.11
NEK1Q96PY6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC22.01■■□□□ 1.11
NEK1Q96PY6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC22.01■■□□□ 1.11
NEK1Q96PY6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NEK1Q96PY6 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC22.01■■□□□ 1.11
NEK1Q96PY6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC22.01■■□□□ 1.11
NEK1Q96PY6 WWOX-216ENST00000569818 525 ntBASIC22.01■■□□□ 1.11
NEK1Q96PY6 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
NEK1Q96PY6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NEK1Q96PY6 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NEK1Q96PY6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
NEK1Q96PY6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NEK1Q96PY6 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC22■■□□□ 1.11
NEK1Q96PY6 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NEK1Q96PY6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
NEK1Q96PY6 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
NEK1Q96PY6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC22■■□□□ 1.11
NEK1Q96PY6 COMP-202ENST00000425807 2292 ntTSL 2 BASIC22■■□□□ 1.11
NEK1Q96PY6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC22■■□□□ 1.11
NEK1Q96PY6 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC22■■□□□ 1.11
NEK1Q96PY6 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NEK1Q96PY6 BICD1-207ENST00000551848 1962 ntBASIC22■■□□□ 1.11
NEK1Q96PY6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC22■■□□□ 1.11
NEK1Q96PY6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NEK1Q96PY6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC22■■□□□ 1.11
NEK1Q96PY6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC22■■□□□ 1.11
NEK1Q96PY6 ECEL1P3-201ENST00000427961 737 ntBASIC22■■□□□ 1.11
NEK1Q96PY6 PHB2-202ENST00000440277 996 ntTSL 5 BASIC22■■□□□ 1.11
NEK1Q96PY6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
NEK1Q96PY6 GXYLT1P3-201ENST00000453058 1193 ntBASIC22■■□□□ 1.11
NEK1Q96PY6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC22■■□□□ 1.11
NEK1Q96PY6 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC22■■□□□ 1.11
NEK1Q96PY6 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NEK1Q96PY6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC22■■□□□ 1.11
NEK1Q96PY6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC22■■□□□ 1.11
NEK1Q96PY6 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC22■■□□□ 1.11
NEK1Q96PY6 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
NEK1Q96PY6 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NEK1Q96PY6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NEK1Q96PY6 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
NEK1Q96PY6 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
NEK1Q96PY6 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.99■■□□□ 1.11
NEK1Q96PY6 AC135050.7-201ENST00000624508 2218 ntBASIC21.99■■□□□ 1.11
NEK1Q96PY6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.99■■□□□ 1.11
NEK1Q96PY6 KRT8P50-201ENST00000562022 1438 ntBASIC21.99■■□□□ 1.11
NEK1Q96PY6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
NEK1Q96PY6 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
NEK1Q96PY6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
NEK1Q96PY6 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NEK1Q96PY6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
NEK1Q96PY6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.99■■□□□ 1.11
NEK1Q96PY6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NEK1Q96PY6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.99■■□□□ 1.11
NEK1Q96PY6 AP000593.1-201ENST00000393668 712 ntBASIC21.99■■□□□ 1.11
NEK1Q96PY6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
NEK1Q96PY6 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
NEK1Q96PY6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.99■■□□□ 1.11
NEK1Q96PY6 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
NEK1Q96PY6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NEK1Q96PY6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
NEK1Q96PY6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
NEK1Q96PY6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NEK1Q96PY6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NEK1Q96PY6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
NEK1Q96PY6 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.99■■□□□ 1.11
NEK1Q96PY6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NEK1Q96PY6 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NEK1Q96PY6 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms