Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 KRT8P3-201ENST00000519669 1449 ntBASIC17.8■□□□□ 0.44
SLC46A1Q96NT5 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC46A1Q96NT5 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC46A1Q96NT5 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.79■□□□□ 0.44
SLC46A1Q96NT5 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.79■□□□□ 0.44
SLC46A1Q96NT5 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC46A1Q96NT5 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.79■□□□□ 0.44
SLC46A1Q96NT5 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.79■□□□□ 0.44
SLC46A1Q96NT5 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SLC46A1Q96NT5 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC46A1Q96NT5 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC46A1Q96NT5 AL022342.1-201ENST00000400363 863 ntBASIC17.79■□□□□ 0.44
SLC46A1Q96NT5 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SLC46A1Q96NT5 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC46A1Q96NT5 KRT18P31-201ENST00000506277 1292 ntBASIC17.79■□□□□ 0.44
SLC46A1Q96NT5 FOSL1P1-201ENST00000511041 816 ntBASIC17.79■□□□□ 0.44
SLC46A1Q96NT5 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC46A1Q96NT5 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC46A1Q96NT5 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC46A1Q96NT5 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SLC46A1Q96NT5 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC46A1Q96NT5 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SLC46A1Q96NT5 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC46A1Q96NT5 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
SLC46A1Q96NT5 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC46A1Q96NT5 AC141586.3-201ENST00000562166 1838 ntBASIC17.79■□□□□ 0.44
SLC46A1Q96NT5 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC46A1Q96NT5 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC46A1Q96NT5 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.79■□□□□ 0.44
SLC46A1Q96NT5 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC46A1Q96NT5 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC46A1Q96NT5 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SLC46A1Q96NT5 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC46A1Q96NT5 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC46A1Q96NT5 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC46A1Q96NT5 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC46A1Q96NT5 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC46A1Q96NT5 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC46A1Q96NT5 TEX21P-204ENST00000641479 1693 ntBASIC17.78■□□□□ 0.44
SLC46A1Q96NT5 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.78■□□□□ 0.44
SLC46A1Q96NT5 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC46A1Q96NT5 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC46A1Q96NT5 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC46A1Q96NT5 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC46A1Q96NT5 AC079781.3-201ENST00000449110 356 ntBASIC17.78■□□□□ 0.44
SLC46A1Q96NT5 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.78■□□□□ 0.44
SLC46A1Q96NT5 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC46A1Q96NT5 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
SLC46A1Q96NT5 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC46A1Q96NT5 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SLC46A1Q96NT5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SLC46A1Q96NT5 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC46A1Q96NT5 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SLC46A1Q96NT5 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC46A1Q96NT5 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SLC46A1Q96NT5 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC46A1Q96NT5 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SLC46A1Q96NT5 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC46A1Q96NT5 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC46A1Q96NT5 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC46A1Q96NT5 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC46A1Q96NT5 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC46A1Q96NT5 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC46A1Q96NT5 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC46A1Q96NT5 TOB2P1-201ENST00000469761 992 ntBASIC17.77■□□□□ 0.44
SLC46A1Q96NT5 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC46A1Q96NT5 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC46A1Q96NT5 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC46A1Q96NT5 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.77■□□□□ 0.44
SLC46A1Q96NT5 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.77■□□□□ 0.44
SLC46A1Q96NT5 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.77■□□□□ 0.44
SLC46A1Q96NT5 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
SLC46A1Q96NT5 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SLC46A1Q96NT5 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC46A1Q96NT5 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC46A1Q96NT5 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC46A1Q96NT5 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC46A1Q96NT5 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC46A1Q96NT5 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.77■□□□□ 0.43
SLC46A1Q96NT5 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC46A1Q96NT5 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SLC46A1Q96NT5 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC46A1Q96NT5 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC46A1Q96NT5 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.77■□□□□ 0.43
SLC46A1Q96NT5 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SLC46A1Q96NT5 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC46A1Q96NT5 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.77■□□□□ 0.43
SLC46A1Q96NT5 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC46A1Q96NT5 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC46A1Q96NT5 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC46A1Q96NT5 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC46A1Q96NT5 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SLC46A1Q96NT5 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC46A1Q96NT5 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC46A1Q96NT5 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC46A1Q96NT5 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC46A1Q96NT5 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC46A1Q96NT5 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC46A1Q96NT5 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC46A1Q96NT5 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms