Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF48Q96MX3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF48Q96MX3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF48Q96MX3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF48Q96MX3 AC092119.3-201ENST00000612618 583 ntBASIC15.13■□□□□ 0.01
ZNF48Q96MX3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF48Q96MX3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF48Q96MX3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF48Q96MX3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF48Q96MX3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF48Q96MX3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF48Q96MX3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
ZNF48Q96MX3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF48Q96MX3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
ZNF48Q96MX3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF48Q96MX3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF48Q96MX3 TNXA-203ENST00000507684 2038 ntBASIC15.12■□□□□ 0.01
ZNF48Q96MX3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
ZNF48Q96MX3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
ZNF48Q96MX3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
ZNF48Q96MX3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF48Q96MX3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF48Q96MX3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF48Q96MX3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF48Q96MX3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF48Q96MX3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
ZNF48Q96MX3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF48Q96MX3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF48Q96MX3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF48Q96MX3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF48Q96MX3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF48Q96MX3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.12■□□□□ 0.01
ZNF48Q96MX3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF48Q96MX3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF48Q96MX3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF48Q96MX3 AC079602.3-201ENST00000623931 403 ntBASIC15.12■□□□□ 0.01
ZNF48Q96MX3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF48Q96MX3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF48Q96MX3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF48Q96MX3 AC141586.3-201ENST00000562166 1838 ntBASIC15.12■□□□□ 0.01
ZNF48Q96MX3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF48Q96MX3 AP000974.1-201ENST00000623909 2387 ntBASIC15.12■□□□□ 0.01
ZNF48Q96MX3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.12■□□□□ 0.01
ZNF48Q96MX3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF48Q96MX3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF48Q96MX3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF48Q96MX3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF48Q96MX3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF48Q96MX3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF48Q96MX3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF48Q96MX3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF48Q96MX3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
ZNF48Q96MX3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF48Q96MX3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ZNF48Q96MX3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF48Q96MX3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF48Q96MX3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
ZNF48Q96MX3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF48Q96MX3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF48Q96MX3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
ZNF48Q96MX3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF48Q96MX3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF48Q96MX3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF48Q96MX3 TPM4P1-201ENST00000436100 807 ntBASIC15.11■□□□□ 0.01
ZNF48Q96MX3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF48Q96MX3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
ZNF48Q96MX3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.11■□□□□ 0.01
ZNF48Q96MX3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.11■□□□□ 0.01
ZNF48Q96MX3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
ZNF48Q96MX3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF48Q96MX3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.11■□□□□ 0.01
ZNF48Q96MX3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF48Q96MX3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC15.11■□□□□ 0.01
ZNF48Q96MX3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF48Q96MX3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
ZNF48Q96MX3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ZNF48Q96MX3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF48Q96MX3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF48Q96MX3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF48Q96MX3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ZNF48Q96MX3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF48Q96MX3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
ZNF48Q96MX3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF48Q96MX3 AC098818.2-201ENST00000564925 2320 ntBASIC15.1■□□□□ 0.01
ZNF48Q96MX3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF48Q96MX3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF48Q96MX3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF48Q96MX3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF48Q96MX3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF48Q96MX3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF48Q96MX3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF48Q96MX3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF48Q96MX3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF48Q96MX3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNF48Q96MX3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNF48Q96MX3 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.1■□□□□ 0.01
ZNF48Q96MX3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
ZNF48Q96MX3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.1■□□□□ 0.01
ZNF48Q96MX3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
ZNF48Q96MX3 AL157888.1-201ENST00000631930 593 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms