Protein–RNA interactions for Protein: Q96LM1

LINC00615, Putative uncharacterized protein encoded by LINC00615, humanhuman

Predicted RBP Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00615Q96LM1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00615Q96LM1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.11■□□□□ 0.49
LINC00615Q96LM1 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00615Q96LM1 PVRIG2P-201ENST00000435460 978 ntBASIC18.11■□□□□ 0.49
LINC00615Q96LM1 AL359075.1-203ENST00000462729 1002 ntBASIC18.11■□□□□ 0.49
LINC00615Q96LM1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.11■□□□□ 0.49
LINC00615Q96LM1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
LINC00615Q96LM1 AC010331.1-201ENST00000611423 582 ntBASIC18.11■□□□□ 0.49
LINC00615Q96LM1 HYMAI.1-201ENST00000620949 238 ntBASIC18.11■□□□□ 0.49
LINC00615Q96LM1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00615Q96LM1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LINC00615Q96LM1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00615Q96LM1 AC009102.3-201ENST00000623118 1491 ntBASIC18.11■□□□□ 0.49
LINC00615Q96LM1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00615Q96LM1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.11■□□□□ 0.49
LINC00615Q96LM1 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LINC00615Q96LM1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LINC00615Q96LM1 AC087289.5-201ENST00000586076 3175 ntBASIC18.11■□□□□ 0.49
LINC00615Q96LM1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00615Q96LM1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00615Q96LM1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.1■□□□□ 0.49
LINC00615Q96LM1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
LINC00615Q96LM1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00615Q96LM1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.1■□□□□ 0.49
LINC00615Q96LM1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.1■□□□□ 0.49
LINC00615Q96LM1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.1■□□□□ 0.49
LINC00615Q96LM1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00615Q96LM1 MIR1224-201ENST00000408193 85 ntBASIC18.1■□□□□ 0.49
LINC00615Q96LM1 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.1■□□□□ 0.49
LINC00615Q96LM1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.1■□□□□ 0.49
LINC00615Q96LM1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.1■□□□□ 0.49
LINC00615Q96LM1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00615Q96LM1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
LINC00615Q96LM1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.1■□□□□ 0.49
LINC00615Q96LM1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.1■□□□□ 0.49
LINC00615Q96LM1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00615Q96LM1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00615Q96LM1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00615Q96LM1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00615Q96LM1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00615Q96LM1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LINC00615Q96LM1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00615Q96LM1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00615Q96LM1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00615Q96LM1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00615Q96LM1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00615Q96LM1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00615Q96LM1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00615Q96LM1 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00615Q96LM1 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00615Q96LM1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.09■□□□□ 0.49
LINC00615Q96LM1 AC112907.2-201ENST00000448639 330 ntBASIC18.09■□□□□ 0.49
LINC00615Q96LM1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.09■□□□□ 0.49
LINC00615Q96LM1 NTF6B-201ENST00000591913 560 ntBASIC18.09■□□□□ 0.49
LINC00615Q96LM1 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.09■□□□□ 0.49
LINC00615Q96LM1 AC079602.3-201ENST00000623931 403 ntBASIC18.09■□□□□ 0.49
LINC00615Q96LM1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.09■□□□□ 0.49
LINC00615Q96LM1 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00615Q96LM1 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00615Q96LM1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
LINC00615Q96LM1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
LINC00615Q96LM1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00615Q96LM1 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LINC00615Q96LM1 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LINC00615Q96LM1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
LINC00615Q96LM1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LINC00615Q96LM1 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LINC00615Q96LM1 SDHAP2-201ENST00000455183 2001 ntBASIC18.08■□□□□ 0.49
LINC00615Q96LM1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LINC00615Q96LM1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LINC00615Q96LM1 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LINC00615Q96LM1 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LINC00615Q96LM1 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LINC00615Q96LM1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.08■□□□□ 0.49
LINC00615Q96LM1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LINC00615Q96LM1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
LINC00615Q96LM1 HLA-F-220ENST00000434407 884 ntBASIC18.08■□□□□ 0.48
LINC00615Q96LM1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC00615Q96LM1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.08■□□□□ 0.48
LINC00615Q96LM1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC00615Q96LM1 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.08■□□□□ 0.48
LINC00615Q96LM1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC00615Q96LM1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC00615Q96LM1 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC00615Q96LM1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
LINC00615Q96LM1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC00615Q96LM1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
LINC00615Q96LM1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LINC00615Q96LM1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.08■□□□□ 0.48
LINC00615Q96LM1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LINC00615Q96LM1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LINC00615Q96LM1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.08■□□□□ 0.48
LINC00615Q96LM1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00615Q96LM1 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
LINC00615Q96LM1 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00615Q96LM1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.07■□□□□ 0.48
LINC00615Q96LM1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00615Q96LM1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00615Q96LM1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00615Q96LM1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms