Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SPG11Q96JI7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SPG11Q96JI7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SPG11Q96JI7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SPG11Q96JI7 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.76■□□□□ 0.11
SPG11Q96JI7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.76■□□□□ 0.11
SPG11Q96JI7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SPG11Q96JI7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SPG11Q96JI7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SPG11Q96JI7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SPG11Q96JI7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC15.76■□□□□ 0.11
SPG11Q96JI7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SPG11Q96JI7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SPG11Q96JI7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SPG11Q96JI7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SPG11Q96JI7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.76■□□□□ 0.11
SPG11Q96JI7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.76■□□□□ 0.11
SPG11Q96JI7 AC106730.1-201ENST00000566722 1090 ntBASIC15.76■□□□□ 0.11
SPG11Q96JI7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.76■□□□□ 0.11
SPG11Q96JI7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SPG11Q96JI7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.76■□□□□ 0.11
SPG11Q96JI7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
SPG11Q96JI7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SPG11Q96JI7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
SPG11Q96JI7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SPG11Q96JI7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SPG11Q96JI7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SPG11Q96JI7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SPG11Q96JI7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15.75■□□□□ 0.11
SPG11Q96JI7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SPG11Q96JI7 AL353692.3-201ENST00000407031 1396 ntBASIC15.75■□□□□ 0.11
SPG11Q96JI7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SPG11Q96JI7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.75■□□□□ 0.11
SPG11Q96JI7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SPG11Q96JI7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SPG11Q96JI7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
SPG11Q96JI7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
SPG11Q96JI7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SPG11Q96JI7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
SPG11Q96JI7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SPG11Q96JI7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
SPG11Q96JI7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SPG11Q96JI7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SPG11Q96JI7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SPG11Q96JI7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SPG11Q96JI7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SPG11Q96JI7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC15.75■□□□□ 0.11
SPG11Q96JI7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.75■□□□□ 0.11
SPG11Q96JI7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SPG11Q96JI7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.75■□□□□ 0.11
SPG11Q96JI7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.75■□□□□ 0.11
SPG11Q96JI7 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.75■□□□□ 0.11
SPG11Q96JI7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.75■□□□□ 0.11
SPG11Q96JI7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.75■□□□□ 0.11
SPG11Q96JI7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SPG11Q96JI7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SPG11Q96JI7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SPG11Q96JI7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.75■□□□□ 0.11
SPG11Q96JI7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC15.74■□□□□ 0.11
SPG11Q96JI7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SPG11Q96JI7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
SPG11Q96JI7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC15.74■□□□□ 0.11
SPG11Q96JI7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SPG11Q96JI7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
SPG11Q96JI7 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SPG11Q96JI7 MINOS1P3-201ENST00000457048 203 ntBASIC15.74■□□□□ 0.11
SPG11Q96JI7 HLA-J-202ENST00000469281 1241 ntBASIC15.74■□□□□ 0.11
SPG11Q96JI7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
SPG11Q96JI7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.74■□□□□ 0.11
SPG11Q96JI7 AL355877.3-201ENST00000622820 899 ntBASIC15.74■□□□□ 0.11
SPG11Q96JI7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.74■□□□□ 0.11
SPG11Q96JI7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
SPG11Q96JI7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SPG11Q96JI7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SPG11Q96JI7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SPG11Q96JI7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SPG11Q96JI7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.74■□□□□ 0.11
SPG11Q96JI7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SPG11Q96JI7 AC099778.1-201ENST00000568593 1911 ntBASIC15.74■□□□□ 0.11
SPG11Q96JI7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.74■□□□□ 0.11
SPG11Q96JI7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.74■□□□□ 0.11
SPG11Q96JI7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SPG11Q96JI7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.74■□□□□ 0.11
SPG11Q96JI7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SPG11Q96JI7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SPG11Q96JI7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.74■□□□□ 0.11
SPG11Q96JI7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.74■□□□□ 0.11
SPG11Q96JI7 GPR32P1-201ENST00000601788 811 ntBASIC15.74■□□□□ 0.11
SPG11Q96JI7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
SPG11Q96JI7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SPG11Q96JI7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPG11Q96JI7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SPG11Q96JI7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
SPG11Q96JI7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPG11Q96JI7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC15.73■□□□□ 0.11
SPG11Q96JI7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SPG11Q96JI7 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SPG11Q96JI7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPG11Q96JI7 POM121L3P-201ENST00000419331 1163 ntBASIC15.73■□□□□ 0.11
SPG11Q96JI7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms