Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
IFT43Q96FT9 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.17■□□□□ 0.66
IFT43Q96FT9 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IFT43Q96FT9 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.17■□□□□ 0.66
IFT43Q96FT9 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
IFT43Q96FT9 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
IFT43Q96FT9 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
IFT43Q96FT9 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IFT43Q96FT9 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
IFT43Q96FT9 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
IFT43Q96FT9 CRYGFP-201ENST00000418459 633 ntBASIC19.17■□□□□ 0.66
IFT43Q96FT9 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.17■□□□□ 0.66
IFT43Q96FT9 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.17■□□□□ 0.66
IFT43Q96FT9 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.17■□□□□ 0.66
IFT43Q96FT9 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.17■□□□□ 0.66
IFT43Q96FT9 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.17■□□□□ 0.66
IFT43Q96FT9 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IFT43Q96FT9 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IFT43Q96FT9 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IFT43Q96FT9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
IFT43Q96FT9 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.17■□□□□ 0.66
IFT43Q96FT9 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.17■□□□□ 0.66
IFT43Q96FT9 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.16■□□□□ 0.66
IFT43Q96FT9 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFT43Q96FT9 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.16■□□□□ 0.66
IFT43Q96FT9 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFT43Q96FT9 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.16■□□□□ 0.66
IFT43Q96FT9 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
IFT43Q96FT9 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
IFT43Q96FT9 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFT43Q96FT9 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
IFT43Q96FT9 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.16■□□□□ 0.66
IFT43Q96FT9 MFAP1P1-201ENST00000442257 1255 ntBASIC19.16■□□□□ 0.66
IFT43Q96FT9 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.16■□□□□ 0.66
IFT43Q96FT9 KRT18P35-201ENST00000510488 1269 ntBASIC19.16■□□□□ 0.66
IFT43Q96FT9 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.16■□□□□ 0.66
IFT43Q96FT9 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.16■□□□□ 0.66
IFT43Q96FT9 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFT43Q96FT9 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFT43Q96FT9 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.16■□□□□ 0.66
IFT43Q96FT9 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
IFT43Q96FT9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFT43Q96FT9 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFT43Q96FT9 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFT43Q96FT9 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFT43Q96FT9 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
IFT43Q96FT9 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.16■□□□□ 0.66
IFT43Q96FT9 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
IFT43Q96FT9 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFT43Q96FT9 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFT43Q96FT9 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
IFT43Q96FT9 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
IFT43Q96FT9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
IFT43Q96FT9 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.16■□□□□ 0.66
IFT43Q96FT9 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.15■□□□□ 0.66
IFT43Q96FT9 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IFT43Q96FT9 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.15■□□□□ 0.66
IFT43Q96FT9 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
IFT43Q96FT9 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
IFT43Q96FT9 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IFT43Q96FT9 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
IFT43Q96FT9 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IFT43Q96FT9 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IFT43Q96FT9 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.15■□□□□ 0.66
IFT43Q96FT9 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IFT43Q96FT9 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IFT43Q96FT9 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.15■□□□□ 0.66
IFT43Q96FT9 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
IFT43Q96FT9 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
IFT43Q96FT9 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
IFT43Q96FT9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.15■□□□□ 0.66
IFT43Q96FT9 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.15■□□□□ 0.66
IFT43Q96FT9 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
IFT43Q96FT9 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.15■□□□□ 0.66
IFT43Q96FT9 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.15■□□□□ 0.66
IFT43Q96FT9 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
IFT43Q96FT9 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
IFT43Q96FT9 PCDHB18P-201ENST00000524813 2368 ntBASIC19.15■□□□□ 0.66
IFT43Q96FT9 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
IFT43Q96FT9 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.15■□□□□ 0.66
IFT43Q96FT9 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
IFT43Q96FT9 AC096733.2-201ENST00000609937 1394 ntBASIC19.15■□□□□ 0.66
IFT43Q96FT9 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.15■□□□□ 0.66
IFT43Q96FT9 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.15■□□□□ 0.66
IFT43Q96FT9 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.15■□□□□ 0.66
IFT43Q96FT9 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IFT43Q96FT9 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
IFT43Q96FT9 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IFT43Q96FT9 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
IFT43Q96FT9 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
IFT43Q96FT9 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
IFT43Q96FT9 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IFT43Q96FT9 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
IFT43Q96FT9 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IFT43Q96FT9 AC006333.2-201ENST00000607957 2099 ntBASIC19.14■□□□□ 0.65
IFT43Q96FT9 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
IFT43Q96FT9 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.14■□□□□ 0.65
IFT43Q96FT9 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
IFT43Q96FT9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.14■□□□□ 0.65
IFT43Q96FT9 LIN28AP1-201ENST00000429574 405 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms