Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDX1Q92499 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
DDX1Q92499 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DDX1Q92499 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
DDX1Q92499 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DDX1Q92499 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.82■□□□□ 0.76
DDX1Q92499 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDX1Q92499 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.82■□□□□ 0.76
DDX1Q92499 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.82■□□□□ 0.76
DDX1Q92499 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.82■□□□□ 0.76
DDX1Q92499 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.82■□□□□ 0.76
DDX1Q92499 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.82■□□□□ 0.76
DDX1Q92499 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.82■□□□□ 0.76
DDX1Q92499 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DDX1Q92499 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.82■□□□□ 0.76
DDX1Q92499 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.82■□□□□ 0.76
DDX1Q92499 KRT8P9-201ENST00000558927 1449 ntBASIC19.82■□□□□ 0.76
DDX1Q92499 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.82■□□□□ 0.76
DDX1Q92499 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDX1Q92499 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.82■□□□□ 0.76
DDX1Q92499 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DDX1Q92499 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDX1Q92499 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
DDX1Q92499 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
DDX1Q92499 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DDX1Q92499 AL354751.1-201ENST00000412768 1863 ntBASIC19.82■□□□□ 0.76
DDX1Q92499 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
DDX1Q92499 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX1Q92499 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX1Q92499 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX1Q92499 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX1Q92499 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX1Q92499 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX1Q92499 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
DDX1Q92499 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX1Q92499 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
DDX1Q92499 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.81■□□□□ 0.76
DDX1Q92499 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
DDX1Q92499 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.81■□□□□ 0.76
DDX1Q92499 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.81■□□□□ 0.76
DDX1Q92499 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.81■□□□□ 0.76
DDX1Q92499 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
DDX1Q92499 MYC-208ENST00000641036 567 ntBASIC19.81■□□□□ 0.76
DDX1Q92499 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX1Q92499 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX1Q92499 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX1Q92499 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX1Q92499 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX1Q92499 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.81■□□□□ 0.76
DDX1Q92499 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX1Q92499 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
DDX1Q92499 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
DDX1Q92499 CYP2D8P-201ENST00000433633 1490 ntBASIC19.8■□□□□ 0.76
DDX1Q92499 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.8■□□□□ 0.76
DDX1Q92499 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
DDX1Q92499 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DDX1Q92499 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX1Q92499 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
DDX1Q92499 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX1Q92499 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.8■□□□□ 0.76
DDX1Q92499 MYLKP1-201ENST00000509077 1580 ntBASIC19.8■□□□□ 0.76
DDX1Q92499 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX1Q92499 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DDX1Q92499 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
DDX1Q92499 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.8■□□□□ 0.76
DDX1Q92499 INGX-201ENST00000359239 846 ntBASIC19.8■□□□□ 0.76
DDX1Q92499 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
DDX1Q92499 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX1Q92499 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.8■□□□□ 0.76
DDX1Q92499 ATP5G1P1-201ENST00000448724 379 ntBASIC19.8■□□□□ 0.76
DDX1Q92499 TSPY17P-201ENST00000450329 467 ntBASIC19.8■□□□□ 0.76
DDX1Q92499 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
DDX1Q92499 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX1Q92499 MIR3180-5-201ENST00000583743 153 ntBASIC19.8■□□□□ 0.76
DDX1Q92499 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.8■□□□□ 0.76
DDX1Q92499 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX1Q92499 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX1Q92499 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DDX1Q92499 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
DDX1Q92499 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX1Q92499 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
DDX1Q92499 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDX1Q92499 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
DDX1Q92499 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDX1Q92499 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDX1Q92499 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDX1Q92499 TSPY14P-201ENST00000303979 915 ntBASIC19.79■□□□□ 0.76
DDX1Q92499 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.79■□□□□ 0.76
DDX1Q92499 AC007663.1-201ENST00000438948 1240 ntBASIC19.79■□□□□ 0.76
DDX1Q92499 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.79■□□□□ 0.76
DDX1Q92499 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.79■□□□□ 0.76
DDX1Q92499 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
DDX1Q92499 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDX1Q92499 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDX1Q92499 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.79■□□□□ 0.76
DDX1Q92499 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
DDX1Q92499 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
DDX1Q92499 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
DDX1Q92499 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.79■□□□□ 0.76
DDX1Q92499 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms