Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
STAG1Q8WVM7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
STAG1Q8WVM7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
STAG1Q8WVM7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
STAG1Q8WVM7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
STAG1Q8WVM7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.91■■□□□ 1.1
STAG1Q8WVM7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
STAG1Q8WVM7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
STAG1Q8WVM7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.91■■□□□ 1.1
STAG1Q8WVM7 RASA4DP-201ENST00000460726 1199 ntBASIC21.91■■□□□ 1.1
STAG1Q8WVM7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.91■■□□□ 1.1
STAG1Q8WVM7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.91■■□□□ 1.1
STAG1Q8WVM7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.91■■□□□ 1.1
STAG1Q8WVM7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
STAG1Q8WVM7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
STAG1Q8WVM7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
STAG1Q8WVM7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.91■■□□□ 1.1
STAG1Q8WVM7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
STAG1Q8WVM7 MYLKP1-201ENST00000509077 1580 ntBASIC21.91■■□□□ 1.1
STAG1Q8WVM7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
STAG1Q8WVM7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
STAG1Q8WVM7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
STAG1Q8WVM7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.9■■□□□ 1.1
STAG1Q8WVM7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
STAG1Q8WVM7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
STAG1Q8WVM7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
STAG1Q8WVM7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.9■■□□□ 1.1
STAG1Q8WVM7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.9■■□□□ 1.1
STAG1Q8WVM7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
STAG1Q8WVM7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
STAG1Q8WVM7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
STAG1Q8WVM7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.9■■□□□ 1.1
STAG1Q8WVM7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
STAG1Q8WVM7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
STAG1Q8WVM7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
STAG1Q8WVM7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.9■■□□□ 1.1
STAG1Q8WVM7 AL359075.1-203ENST00000462729 1002 ntBASIC21.9■■□□□ 1.1
STAG1Q8WVM7 AC034232.1-201ENST00000506026 1064 ntBASIC21.9■■□□□ 1.1
STAG1Q8WVM7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.9■■□□□ 1.1
STAG1Q8WVM7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.9■■□□□ 1.1
STAG1Q8WVM7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
STAG1Q8WVM7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.9■■□□□ 1.1
STAG1Q8WVM7 AL157888.1-201ENST00000631930 593 ntBASIC21.9■■□□□ 1.1
STAG1Q8WVM7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
STAG1Q8WVM7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
STAG1Q8WVM7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
STAG1Q8WVM7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
STAG1Q8WVM7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.9■■□□□ 1.1
STAG1Q8WVM7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
STAG1Q8WVM7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
STAG1Q8WVM7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
STAG1Q8WVM7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
STAG1Q8WVM7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
STAG1Q8WVM7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.89■■□□□ 1.1
STAG1Q8WVM7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
STAG1Q8WVM7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.89■■□□□ 1.1
STAG1Q8WVM7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
STAG1Q8WVM7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
STAG1Q8WVM7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.89■■□□□ 1.09
STAG1Q8WVM7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
STAG1Q8WVM7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
STAG1Q8WVM7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.89■■□□□ 1.09
STAG1Q8WVM7 AL163051.1-201ENST00000569214 1512 ntBASIC21.89■■□□□ 1.09
STAG1Q8WVM7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.89■■□□□ 1.09
STAG1Q8WVM7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
STAG1Q8WVM7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
STAG1Q8WVM7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
STAG1Q8WVM7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.88■■□□□ 1.09
STAG1Q8WVM7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
STAG1Q8WVM7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
STAG1Q8WVM7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.88■■□□□ 1.09
STAG1Q8WVM7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
STAG1Q8WVM7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
STAG1Q8WVM7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
STAG1Q8WVM7 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
STAG1Q8WVM7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.88■■□□□ 1.09
STAG1Q8WVM7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
STAG1Q8WVM7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
STAG1Q8WVM7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
STAG1Q8WVM7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.88■■□□□ 1.09
STAG1Q8WVM7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.88■■□□□ 1.09
STAG1Q8WVM7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
STAG1Q8WVM7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
STAG1Q8WVM7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
STAG1Q8WVM7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.88■■□□□ 1.09
STAG1Q8WVM7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
STAG1Q8WVM7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
STAG1Q8WVM7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
STAG1Q8WVM7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
STAG1Q8WVM7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
STAG1Q8WVM7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
STAG1Q8WVM7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
STAG1Q8WVM7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
STAG1Q8WVM7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
STAG1Q8WVM7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.87■■□□□ 1.09
STAG1Q8WVM7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
STAG1Q8WVM7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.87■■□□□ 1.09
STAG1Q8WVM7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.87■■□□□ 1.09
STAG1Q8WVM7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.87■■□□□ 1.09
STAG1Q8WVM7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms