Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.89■□□□□ 0.45
CLHC1Q8NHS4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.89■□□□□ 0.45
CLHC1Q8NHS4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.89■□□□□ 0.45
CLHC1Q8NHS4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.89■□□□□ 0.45
CLHC1Q8NHS4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLHC1Q8NHS4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.89■□□□□ 0.45
CLHC1Q8NHS4 FAM197Y4-202ENST00000622692 608 ntBASIC17.89■□□□□ 0.45
CLHC1Q8NHS4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CLHC1Q8NHS4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLHC1Q8NHS4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLHC1Q8NHS4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLHC1Q8NHS4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
CLHC1Q8NHS4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.89■□□□□ 0.45
CLHC1Q8NHS4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLHC1Q8NHS4 AL357033.4-201ENST00000617703 1807 ntBASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 AL353807.1-201ENST00000427475 662 ntBASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 AC011506.1-201ENST00000474329 610 ntBASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 AL031985.4-201ENST00000642138 673 ntBASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CLHC1Q8NHS4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CLHC1Q8NHS4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLHC1Q8NHS4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.87■□□□□ 0.45
CLHC1Q8NHS4 NOC2LP1-202ENST00000452600 2235 ntBASIC17.87■□□□□ 0.45
CLHC1Q8NHS4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CLHC1Q8NHS4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLHC1Q8NHS4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLHC1Q8NHS4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CLHC1Q8NHS4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLHC1Q8NHS4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CLHC1Q8NHS4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLHC1Q8NHS4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLHC1Q8NHS4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLHC1Q8NHS4 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.87■□□□□ 0.45
CLHC1Q8NHS4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
CLHC1Q8NHS4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.87■□□□□ 0.45
CLHC1Q8NHS4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.87■□□□□ 0.45
CLHC1Q8NHS4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.87■□□□□ 0.45
CLHC1Q8NHS4 AL359736.2-201ENST00000621992 437 ntBASIC17.87■□□□□ 0.45
CLHC1Q8NHS4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.87■□□□□ 0.45
CLHC1Q8NHS4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLHC1Q8NHS4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLHC1Q8NHS4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CLHC1Q8NHS4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLHC1Q8NHS4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLHC1Q8NHS4 AC079598.2-202ENST00000546624 1451 ntBASIC17.87■□□□□ 0.45
CLHC1Q8NHS4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLHC1Q8NHS4 RCC2P3-201ENST00000418112 1537 ntBASIC17.87■□□□□ 0.45
CLHC1Q8NHS4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLHC1Q8NHS4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLHC1Q8NHS4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.87■□□□□ 0.45
CLHC1Q8NHS4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.87■□□□□ 0.45
CLHC1Q8NHS4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 ABALON-201ENST00000629058 1903 ntBASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 FAM207BP-201ENST00000447172 505 ntBASIC17.86■□□□□ 0.45
CLHC1Q8NHS4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms