Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC89Q8N998 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC89Q8N998 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC89Q8N998 AC004980.1-204ENST00000429707 299 ntBASIC19.34■□□□□ 0.69
CCDC89Q8N998 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC89Q8N998 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC89Q8N998 MYC-208ENST00000641036 567 ntBASIC19.34■□□□□ 0.69
CCDC89Q8N998 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC89Q8N998 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC89Q8N998 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC89Q8N998 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC89Q8N998 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC89Q8N998 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC89Q8N998 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC89Q8N998 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.33■□□□□ 0.69
CCDC89Q8N998 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC89Q8N998 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CCDC89Q8N998 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC89Q8N998 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC89Q8N998 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC89Q8N998 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC89Q8N998 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC89Q8N998 HTR7P1-201ENST00000538670 1336 ntBASIC19.33■□□□□ 0.69
CCDC89Q8N998 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.33■□□□□ 0.69
CCDC89Q8N998 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC89Q8N998 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC89Q8N998 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC89Q8N998 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC89Q8N998 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC89Q8N998 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC89Q8N998 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC89Q8N998 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.33■□□□□ 0.68
CCDC89Q8N998 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CCDC89Q8N998 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC89Q8N998 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC89Q8N998 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC89Q8N998 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC89Q8N998 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC89Q8N998 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC89Q8N998 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CCDC89Q8N998 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC89Q8N998 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC89Q8N998 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC89Q8N998 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CCDC89Q8N998 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC89Q8N998 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC89Q8N998 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC89Q8N998 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC89Q8N998 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC89Q8N998 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC89Q8N998 PCDHB18P-201ENST00000524813 2368 ntBASIC19.32■□□□□ 0.68
CCDC89Q8N998 PKD1P1-201ENST00000458669 6805 ntBASIC19.32■□□□□ 0.68
CCDC89Q8N998 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC89Q8N998 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC89Q8N998 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC89Q8N998 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC89Q8N998 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC89Q8N998 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC89Q8N998 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.32■□□□□ 0.68
CCDC89Q8N998 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC89Q8N998 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.32■□□□□ 0.68
CCDC89Q8N998 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC89Q8N998 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC89Q8N998 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.32■□□□□ 0.68
CCDC89Q8N998 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC89Q8N998 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC89Q8N998 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC89Q8N998 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC89Q8N998 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC89Q8N998 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC89Q8N998 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC89Q8N998 KRT8P32-201ENST00000512863 1461 ntBASIC19.31■□□□□ 0.68
CCDC89Q8N998 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC89Q8N998 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC89Q8N998 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC89Q8N998 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC89Q8N998 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC89Q8N998 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC89Q8N998 AL353807.1-201ENST00000427475 662 ntBASIC19.31■□□□□ 0.68
CCDC89Q8N998 KSR1P1-201ENST00000446298 240 ntBASIC19.31■□□□□ 0.68
CCDC89Q8N998 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC89Q8N998 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC89Q8N998 AL353708.3-201ENST00000610272 989 ntBASIC19.31■□□□□ 0.68
CCDC89Q8N998 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC89Q8N998 AL499627.1-201ENST00000569373 2188 ntBASIC19.31■□□□□ 0.68
CCDC89Q8N998 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC89Q8N998 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC89Q8N998 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC89Q8N998 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.31■□□□□ 0.68
CCDC89Q8N998 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC89Q8N998 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC89Q8N998 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC89Q8N998 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CCDC89Q8N998 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC89Q8N998 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC89Q8N998 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC89Q8N998 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC89Q8N998 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC89Q8N998 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC89Q8N998 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms