Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
EFCAB3Q8N7B9 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EFCAB3Q8N7B9 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EFCAB3Q8N7B9 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
EFCAB3Q8N7B9 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EFCAB3Q8N7B9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EFCAB3Q8N7B9 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.5■□□□□ 0.55
EFCAB3Q8N7B9 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
EFCAB3Q8N7B9 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
EFCAB3Q8N7B9 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EFCAB3Q8N7B9 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC18.5■□□□□ 0.55
EFCAB3Q8N7B9 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.5■□□□□ 0.55
EFCAB3Q8N7B9 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.5■□□□□ 0.55
EFCAB3Q8N7B9 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.5■□□□□ 0.55
EFCAB3Q8N7B9 AL355355.2-201ENST00000442321 338 ntBASIC18.5■□□□□ 0.55
EFCAB3Q8N7B9 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.5■□□□□ 0.55
EFCAB3Q8N7B9 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.5■□□□□ 0.55
EFCAB3Q8N7B9 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.5■□□□□ 0.55
EFCAB3Q8N7B9 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.5■□□□□ 0.55
EFCAB3Q8N7B9 RN7SL850P-201ENST00000579959 291 ntBASIC18.5■□□□□ 0.55
EFCAB3Q8N7B9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.5■□□□□ 0.55
EFCAB3Q8N7B9 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
EFCAB3Q8N7B9 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.5■□□□□ 0.55
EFCAB3Q8N7B9 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
EFCAB3Q8N7B9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EFCAB3Q8N7B9 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
EFCAB3Q8N7B9 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.5■□□□□ 0.55
EFCAB3Q8N7B9 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
EFCAB3Q8N7B9 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EFCAB3Q8N7B9 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
EFCAB3Q8N7B9 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
EFCAB3Q8N7B9 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 TUBB8P6-201ENST00000436895 1288 ntBASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 AC026471.5-201ENST00000615068 467 ntBASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 Z98044.1-201ENST00000632503 1764 ntBASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
EFCAB3Q8N7B9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.48■□□□□ 0.55
EFCAB3Q8N7B9 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
EFCAB3Q8N7B9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
EFCAB3Q8N7B9 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.48■□□□□ 0.55
EFCAB3Q8N7B9 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
EFCAB3Q8N7B9 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
EFCAB3Q8N7B9 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
EFCAB3Q8N7B9 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.48■□□□□ 0.55
EFCAB3Q8N7B9 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
EFCAB3Q8N7B9 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
EFCAB3Q8N7B9 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
EFCAB3Q8N7B9 MMP23A-201ENST00000234610 1017 ntBASIC18.48■□□□□ 0.55
EFCAB3Q8N7B9 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
EFCAB3Q8N7B9 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
EFCAB3Q8N7B9 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.48■□□□□ 0.55
EFCAB3Q8N7B9 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.48■□□□□ 0.55
EFCAB3Q8N7B9 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.48■□□□□ 0.55
EFCAB3Q8N7B9 AL158211.2-201ENST00000607282 395 ntBASIC18.48■□□□□ 0.55
EFCAB3Q8N7B9 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.48■□□□□ 0.55
EFCAB3Q8N7B9 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
EFCAB3Q8N7B9 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
EFCAB3Q8N7B9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
EFCAB3Q8N7B9 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
EFCAB3Q8N7B9 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
EFCAB3Q8N7B9 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
EFCAB3Q8N7B9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
EFCAB3Q8N7B9 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
EFCAB3Q8N7B9 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
EFCAB3Q8N7B9 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.47■□□□□ 0.55
EFCAB3Q8N7B9 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
EFCAB3Q8N7B9 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms