Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRAM1L1Q8N609 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAM1L1Q8N609 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAM1L1Q8N609 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TRAM1L1Q8N609 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAM1L1Q8N609 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.39■□□□□ 0.53
TRAM1L1Q8N609 STARP1-201ENST00000397973 869 ntBASIC18.39■□□□□ 0.53
TRAM1L1Q8N609 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAM1L1Q8N609 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRAM1L1Q8N609 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TRAM1L1Q8N609 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAM1L1Q8N609 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
TRAM1L1Q8N609 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAM1L1Q8N609 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TRAM1L1Q8N609 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAM1L1Q8N609 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAM1L1Q8N609 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAM1L1Q8N609 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TRAM1L1Q8N609 MYLKP1-201ENST00000509077 1580 ntBASIC18.38■□□□□ 0.53
TRAM1L1Q8N609 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAM1L1Q8N609 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAM1L1Q8N609 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAM1L1Q8N609 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAM1L1Q8N609 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAM1L1Q8N609 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TRAM1L1Q8N609 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAM1L1Q8N609 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRAM1L1Q8N609 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAM1L1Q8N609 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAM1L1Q8N609 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAM1L1Q8N609 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
TRAM1L1Q8N609 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.38■□□□□ 0.53
TRAM1L1Q8N609 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.38■□□□□ 0.53
TRAM1L1Q8N609 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.38■□□□□ 0.53
TRAM1L1Q8N609 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.38■□□□□ 0.53
TRAM1L1Q8N609 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.38■□□□□ 0.53
TRAM1L1Q8N609 AC009065.1-201ENST00000564055 1225 ntBASIC18.38■□□□□ 0.53
TRAM1L1Q8N609 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
TRAM1L1Q8N609 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAM1L1Q8N609 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TRAM1L1Q8N609 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRAM1L1Q8N609 AL499627.1-201ENST00000569373 2188 ntBASIC18.38■□□□□ 0.53
TRAM1L1Q8N609 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TRAM1L1Q8N609 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAM1L1Q8N609 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAM1L1Q8N609 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.38■□□□□ 0.53
TRAM1L1Q8N609 AC087289.5-201ENST00000586076 3175 ntBASIC18.38■□□□□ 0.53
TRAM1L1Q8N609 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.38■□□□□ 0.53
TRAM1L1Q8N609 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 AC093503.3-201ENST00000624917 2352 ntBASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 RASA4DP-201ENST00000460726 1199 ntBASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 AL590326.2-201ENST00000625139 305 ntBASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAM1L1Q8N609 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.36■□□□□ 0.53
TRAM1L1Q8N609 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAM1L1Q8N609 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.36■□□□□ 0.53
TRAM1L1Q8N609 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAM1L1Q8N609 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAM1L1Q8N609 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAM1L1Q8N609 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRAM1L1Q8N609 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAM1L1Q8N609 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TRAM1L1Q8N609 MIR1224-201ENST00000408193 85 ntBASIC18.36■□□□□ 0.53
TRAM1L1Q8N609 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAM1L1Q8N609 SPDYE15P-201ENST00000424157 909 ntBASIC18.36■□□□□ 0.53
TRAM1L1Q8N609 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms