Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZC3H3Q8IXZ2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZC3H3Q8IXZ2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZC3H3Q8IXZ2 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZC3H3Q8IXZ2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZC3H3Q8IXZ2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZC3H3Q8IXZ2 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZC3H3Q8IXZ2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZC3H3Q8IXZ2 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.2■□□□□ 0.82
ZC3H3Q8IXZ2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
ZC3H3Q8IXZ2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H3Q8IXZ2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H3Q8IXZ2 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.19■□□□□ 0.82
ZC3H3Q8IXZ2 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H3Q8IXZ2 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H3Q8IXZ2 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H3Q8IXZ2 MMP23A-201ENST00000234610 1017 ntBASIC20.19■□□□□ 0.82
ZC3H3Q8IXZ2 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H3Q8IXZ2 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
ZC3H3Q8IXZ2 MIR149-201ENST00000384879 89 ntBASIC20.19■□□□□ 0.82
ZC3H3Q8IXZ2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H3Q8IXZ2 KRT18P23-201ENST00000435622 1283 ntBASIC20.19■□□□□ 0.82
ZC3H3Q8IXZ2 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H3Q8IXZ2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.19■□□□□ 0.82
ZC3H3Q8IXZ2 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
ZC3H3Q8IXZ2 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.19■□□□□ 0.82
ZC3H3Q8IXZ2 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H3Q8IXZ2 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H3Q8IXZ2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H3Q8IXZ2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZC3H3Q8IXZ2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.19■□□□□ 0.82
ZC3H3Q8IXZ2 AC007613.1-201ENST00000572811 2597 ntBASIC20.19■□□□□ 0.82
ZC3H3Q8IXZ2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H3Q8IXZ2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H3Q8IXZ2 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H3Q8IXZ2 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H3Q8IXZ2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H3Q8IXZ2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H3Q8IXZ2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.18■□□□□ 0.82
ZC3H3Q8IXZ2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H3Q8IXZ2 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H3Q8IXZ2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H3Q8IXZ2 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H3Q8IXZ2 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H3Q8IXZ2 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H3Q8IXZ2 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ZC3H3Q8IXZ2 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.18■□□□□ 0.82
ZC3H3Q8IXZ2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H3Q8IXZ2 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H3Q8IXZ2 AC104390.1-201ENST00000555663 520 ntBASIC20.18■□□□□ 0.82
ZC3H3Q8IXZ2 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H3Q8IXZ2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ZC3H3Q8IXZ2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
ZC3H3Q8IXZ2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
ZC3H3Q8IXZ2 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H3Q8IXZ2 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H3Q8IXZ2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZC3H3Q8IXZ2 NOC2LP2-201ENST00000407594 1944 ntBASIC20.17■□□□□ 0.82
ZC3H3Q8IXZ2 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H3Q8IXZ2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H3Q8IXZ2 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H3Q8IXZ2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.17■□□□□ 0.82
ZC3H3Q8IXZ2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H3Q8IXZ2 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H3Q8IXZ2 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.17■□□□□ 0.82
ZC3H3Q8IXZ2 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H3Q8IXZ2 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.17■□□□□ 0.82
ZC3H3Q8IXZ2 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.17■□□□□ 0.82
ZC3H3Q8IXZ2 MIR3180-4-201ENST00000582223 153 ntBASIC20.17■□□□□ 0.82
ZC3H3Q8IXZ2 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H3Q8IXZ2 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.17■□□□□ 0.82
ZC3H3Q8IXZ2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.17■□□□□ 0.82
ZC3H3Q8IXZ2 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
ZC3H3Q8IXZ2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ZC3H3Q8IXZ2 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.17■□□□□ 0.82
ZC3H3Q8IXZ2 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.17■□□□□ 0.82
ZC3H3Q8IXZ2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H3Q8IXZ2 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H3Q8IXZ2 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H3Q8IXZ2 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.17■□□□□ 0.82
ZC3H3Q8IXZ2 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H3Q8IXZ2 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H3Q8IXZ2 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ZC3H3Q8IXZ2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZC3H3Q8IXZ2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZC3H3Q8IXZ2 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZC3H3Q8IXZ2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
ZC3H3Q8IXZ2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZC3H3Q8IXZ2 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZC3H3Q8IXZ2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.16■□□□□ 0.82
ZC3H3Q8IXZ2 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
ZC3H3Q8IXZ2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZC3H3Q8IXZ2 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZC3H3Q8IXZ2 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.16■□□□□ 0.82
ZC3H3Q8IXZ2 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
ZC3H3Q8IXZ2 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ZC3H3Q8IXZ2 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.16■□□□□ 0.82
ZC3H3Q8IXZ2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.16■□□□□ 0.82
ZC3H3Q8IXZ2 NAPSB-206ENST00000562112 1266 ntBASIC20.16■□□□□ 0.82
ZC3H3Q8IXZ2 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms