Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM42Q8IWZ5 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.57■□□□□ 0.56
TRIM42Q8IWZ5 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM42Q8IWZ5 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.57■□□□□ 0.56
TRIM42Q8IWZ5 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.57■□□□□ 0.56
TRIM42Q8IWZ5 AL160286.2-201ENST00000567150 934 ntBASIC18.57■□□□□ 0.56
TRIM42Q8IWZ5 AC092118.2-201ENST00000613495 667 ntBASIC18.57■□□□□ 0.56
TRIM42Q8IWZ5 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM42Q8IWZ5 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM42Q8IWZ5 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.57■□□□□ 0.56
TRIM42Q8IWZ5 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM42Q8IWZ5 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
TRIM42Q8IWZ5 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.57■□□□□ 0.56
TRIM42Q8IWZ5 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRIM42Q8IWZ5 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TRIM42Q8IWZ5 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 RCC2P6-201ENST00000526625 1557 ntBASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRIM42Q8IWZ5 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM42Q8IWZ5 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.55■□□□□ 0.56
TRIM42Q8IWZ5 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM42Q8IWZ5 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM42Q8IWZ5 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM42Q8IWZ5 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM42Q8IWZ5 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TRIM42Q8IWZ5 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM42Q8IWZ5 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM42Q8IWZ5 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM42Q8IWZ5 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.55■□□□□ 0.56
TRIM42Q8IWZ5 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.55■□□□□ 0.56
TRIM42Q8IWZ5 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TRIM42Q8IWZ5 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.55■□□□□ 0.56
TRIM42Q8IWZ5 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.55■□□□□ 0.56
TRIM42Q8IWZ5 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
TRIM42Q8IWZ5 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM42Q8IWZ5 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM42Q8IWZ5 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM42Q8IWZ5 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TRIM42Q8IWZ5 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM42Q8IWZ5 AC135776.1-201ENST00000319817 2481 ntBASIC18.55■□□□□ 0.56
TRIM42Q8IWZ5 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.55■□□□□ 0.56
TRIM42Q8IWZ5 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM42Q8IWZ5 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
TRIM42Q8IWZ5 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRIM42Q8IWZ5 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 MTMR9LP-203ENST00000426597 1545 ntBASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.54■□□□□ 0.56
TRIM42Q8IWZ5 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms