Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VRK2Q86Y07 AC012618.2-201ENST00000428058 849 ntBASIC17.23■□□□□ 0.35
VRK2Q86Y07 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VRK2Q86Y07 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.23■□□□□ 0.35
VRK2Q86Y07 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.23■□□□□ 0.35
VRK2Q86Y07 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
VRK2Q86Y07 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.23■□□□□ 0.35
VRK2Q86Y07 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.23■□□□□ 0.35
VRK2Q86Y07 AC233702.5-201ENST00000584107 538 ntBASIC17.23■□□□□ 0.35
VRK2Q86Y07 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.23■□□□□ 0.35
VRK2Q86Y07 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
VRK2Q86Y07 AL049637.2-201ENST00000641778 930 ntBASIC17.23■□□□□ 0.35
VRK2Q86Y07 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
VRK2Q86Y07 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VRK2Q86Y07 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
VRK2Q86Y07 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VRK2Q86Y07 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
VRK2Q86Y07 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VRK2Q86Y07 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.23■□□□□ 0.35
VRK2Q86Y07 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VRK2Q86Y07 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VRK2Q86Y07 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
VRK2Q86Y07 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VRK2Q86Y07 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.23■□□□□ 0.35
VRK2Q86Y07 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
VRK2Q86Y07 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.22■□□□□ 0.35
VRK2Q86Y07 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VRK2Q86Y07 AC112777.1-201ENST00000540175 1423 ntBASIC17.22■□□□□ 0.35
VRK2Q86Y07 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VRK2Q86Y07 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
VRK2Q86Y07 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
VRK2Q86Y07 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VRK2Q86Y07 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VRK2Q86Y07 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.22■□□□□ 0.35
VRK2Q86Y07 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
VRK2Q86Y07 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VRK2Q86Y07 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.22■□□□□ 0.35
VRK2Q86Y07 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.22■□□□□ 0.35
VRK2Q86Y07 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VRK2Q86Y07 AC097488.1-201ENST00000507834 756 ntBASIC17.22■□□□□ 0.35
VRK2Q86Y07 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VRK2Q86Y07 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.22■□□□□ 0.35
VRK2Q86Y07 DGCR10-201ENST00000609839 495 ntBASIC17.22■□□□□ 0.35
VRK2Q86Y07 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.22■□□□□ 0.35
VRK2Q86Y07 REXO1L10P-201ENST00000615707 1290 ntBASIC17.22■□□□□ 0.35
VRK2Q86Y07 REXO1L12P-201ENST00000622156 912 ntBASIC17.22■□□□□ 0.35
VRK2Q86Y07 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
VRK2Q86Y07 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VRK2Q86Y07 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VRK2Q86Y07 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VRK2Q86Y07 AC079598.2-202ENST00000546624 1451 ntBASIC17.22■□□□□ 0.35
VRK2Q86Y07 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
VRK2Q86Y07 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
VRK2Q86Y07 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VRK2Q86Y07 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
VRK2Q86Y07 KRT8P45-201ENST00000414328 1447 ntBASIC17.21■□□□□ 0.35
VRK2Q86Y07 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VRK2Q86Y07 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VRK2Q86Y07 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VRK2Q86Y07 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VRK2Q86Y07 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.21■□□□□ 0.35
VRK2Q86Y07 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VRK2Q86Y07 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
VRK2Q86Y07 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VRK2Q86Y07 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VRK2Q86Y07 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
VRK2Q86Y07 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.21■□□□□ 0.35
VRK2Q86Y07 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.21■□□□□ 0.35
VRK2Q86Y07 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
VRK2Q86Y07 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.21■□□□□ 0.35
VRK2Q86Y07 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.21■□□□□ 0.35
VRK2Q86Y07 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.21■□□□□ 0.35
VRK2Q86Y07 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.21■□□□□ 0.35
VRK2Q86Y07 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.21■□□□□ 0.35
VRK2Q86Y07 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.21■□□□□ 0.35
VRK2Q86Y07 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.21■□□□□ 0.35
VRK2Q86Y07 Z99916.2-201ENST00000604037 246 ntBASIC17.21■□□□□ 0.35
VRK2Q86Y07 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.21■□□□□ 0.35
VRK2Q86Y07 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VRK2Q86Y07 MYC-208ENST00000641036 567 ntBASIC17.21■□□□□ 0.35
VRK2Q86Y07 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
VRK2Q86Y07 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
VRK2Q86Y07 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VRK2Q86Y07 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
VRK2Q86Y07 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
VRK2Q86Y07 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VRK2Q86Y07 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
VRK2Q86Y07 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.21■□□□□ 0.34
VRK2Q86Y07 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.34
VRK2Q86Y07 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
VRK2Q86Y07 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.21■□□□□ 0.34
VRK2Q86Y07 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
VRK2Q86Y07 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.2■□□□□ 0.34
VRK2Q86Y07 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VRK2Q86Y07 GPAT2P1-201ENST00000444924 1672 ntBASIC17.2■□□□□ 0.34
VRK2Q86Y07 AL109659.2-201ENST00000606809 1674 ntBASIC17.2■□□□□ 0.34
VRK2Q86Y07 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
VRK2Q86Y07 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
VRK2Q86Y07 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
VRK2Q86Y07 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms