Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
TRIM50Q86XT4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM50Q86XT4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM50Q86XT4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM50Q86XT4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM50Q86XT4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM50Q86XT4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM50Q86XT4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TRIM50Q86XT4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM50Q86XT4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM50Q86XT4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM50Q86XT4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM50Q86XT4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM50Q86XT4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.74■□□□□ 0.91
TRIM50Q86XT4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.74■□□□□ 0.91
TRIM50Q86XT4 BX276092.5-203ENST00000456199 560 ntBASIC20.74■□□□□ 0.91
TRIM50Q86XT4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM50Q86XT4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
TRIM50Q86XT4 MIR3180-1-201ENST00000580374 94 ntBASIC20.74■□□□□ 0.91
TRIM50Q86XT4 MIR3180-3-201ENST00000584616 94 ntBASIC20.74■□□□□ 0.91
TRIM50Q86XT4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.74■□□□□ 0.91
TRIM50Q86XT4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM50Q86XT4 AL121672.3-201ENST00000608644 468 ntBASIC20.74■□□□□ 0.91
TRIM50Q86XT4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM50Q86XT4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM50Q86XT4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM50Q86XT4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.74■□□□□ 0.91
TRIM50Q86XT4 AC093525.10-201ENST00000625130 1569 ntBASIC20.74■□□□□ 0.91
TRIM50Q86XT4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM50Q86XT4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TRIM50Q86XT4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM50Q86XT4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM50Q86XT4 AL357033.4-201ENST00000617703 1807 ntBASIC20.74■□□□□ 0.91
TRIM50Q86XT4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM50Q86XT4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM50Q86XT4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM50Q86XT4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TRIM50Q86XT4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
TRIM50Q86XT4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM50Q86XT4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM50Q86XT4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM50Q86XT4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM50Q86XT4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TRIM50Q86XT4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM50Q86XT4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM50Q86XT4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM50Q86XT4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
TRIM50Q86XT4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM50Q86XT4 AL450487.1-201ENST00000426799 995 ntBASIC20.73■□□□□ 0.91
TRIM50Q86XT4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM50Q86XT4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.73■□□□□ 0.91
TRIM50Q86XT4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM50Q86XT4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.73■□□□□ 0.91
TRIM50Q86XT4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
TRIM50Q86XT4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM50Q86XT4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM50Q86XT4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM50Q86XT4 HEIH-201ENST00000623091 1652 ntBASIC20.73■□□□□ 0.91
TRIM50Q86XT4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM50Q86XT4 MTMR9LP-203ENST00000426597 1545 ntBASIC20.73■□□□□ 0.91
TRIM50Q86XT4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.72■□□□□ 0.91
TRIM50Q86XT4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.72■□□□□ 0.91
TRIM50Q86XT4 Z98044.1-201ENST00000632503 1764 ntBASIC20.72■□□□□ 0.91
TRIM50Q86XT4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM50Q86XT4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TRIM50Q86XT4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM50Q86XT4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM50Q86XT4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM50Q86XT4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM50Q86XT4 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM50Q86XT4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.72■□□□□ 0.91
TRIM50Q86XT4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM50Q86XT4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.72■□□□□ 0.91
TRIM50Q86XT4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM50Q86XT4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
TRIM50Q86XT4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM50Q86XT4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
TRIM50Q86XT4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM50Q86XT4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM50Q86XT4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM50Q86XT4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.72■□□□□ 0.91
TRIM50Q86XT4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.72■□□□□ 0.91
TRIM50Q86XT4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM50Q86XT4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.72■□□□□ 0.91
TRIM50Q86XT4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.72■□□□□ 0.91
TRIM50Q86XT4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM50Q86XT4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM50Q86XT4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRIM50Q86XT4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TRIM50Q86XT4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM50Q86XT4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TRIM50Q86XT4 AC116562.4-201ENST00000641316 2276 ntBASIC20.71■□□□□ 0.91
TRIM50Q86XT4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
TRIM50Q86XT4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM50Q86XT4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
TRIM50Q86XT4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM50Q86XT4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM50Q86XT4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.71■□□□□ 0.91
TRIM50Q86XT4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRIM50Q86XT4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms