Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.89■□□□□ 0.29
ATG4DQ86TL0 AP003041.3-201ENST00000527151 707 ntBASIC16.89■□□□□ 0.29
ATG4DQ86TL0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.89■□□□□ 0.29
ATG4DQ86TL0 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
ATG4DQ86TL0 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.89■□□□□ 0.29
ATG4DQ86TL0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATG4DQ86TL0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATG4DQ86TL0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATG4DQ86TL0 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.89■□□□□ 0.29
ATG4DQ86TL0 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.89■□□□□ 0.29
ATG4DQ86TL0 MYLKP1-201ENST00000509077 1580 ntBASIC16.89■□□□□ 0.29
ATG4DQ86TL0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.89■□□□□ 0.29
ATG4DQ86TL0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.89■□□□□ 0.29
ATG4DQ86TL0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
ATG4DQ86TL0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATG4DQ86TL0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATG4DQ86TL0 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ATG4DQ86TL0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATG4DQ86TL0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATG4DQ86TL0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.88■□□□□ 0.29
ATG4DQ86TL0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.88■□□□□ 0.29
ATG4DQ86TL0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.88■□□□□ 0.29
ATG4DQ86TL0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.88■□□□□ 0.29
ATG4DQ86TL0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.88■□□□□ 0.29
ATG4DQ86TL0 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATG4DQ86TL0 CCR12P-201ENST00000446203 998 ntBASIC16.88■□□□□ 0.29
ATG4DQ86TL0 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.88■□□□□ 0.29
ATG4DQ86TL0 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.88■□□□□ 0.29
ATG4DQ86TL0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.88■□□□□ 0.29
ATG4DQ86TL0 AC010947.1-201ENST00000623454 693 ntBASIC16.88■□□□□ 0.29
ATG4DQ86TL0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.88■□□□□ 0.29
ATG4DQ86TL0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATG4DQ86TL0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.88■□□□□ 0.29
ATG4DQ86TL0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
ATG4DQ86TL0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATG4DQ86TL0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.88■□□□□ 0.29
ATG4DQ86TL0 AC034236.2-201ENST00000606662 1610 ntBASIC16.88■□□□□ 0.29
ATG4DQ86TL0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATG4DQ86TL0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ATG4DQ86TL0 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
ATG4DQ86TL0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATG4DQ86TL0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATG4DQ86TL0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATG4DQ86TL0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
ATG4DQ86TL0 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATG4DQ86TL0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
ATG4DQ86TL0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATG4DQ86TL0 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATG4DQ86TL0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATG4DQ86TL0 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
ATG4DQ86TL0 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
ATG4DQ86TL0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATG4DQ86TL0 AP000593.1-201ENST00000393668 712 ntBASIC16.87■□□□□ 0.29
ATG4DQ86TL0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.87■□□□□ 0.29
ATG4DQ86TL0 C2orf69P3-201ENST00000565542 1120 ntBASIC16.87■□□□□ 0.29
ATG4DQ86TL0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.87■□□□□ 0.29
ATG4DQ86TL0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.87■□□□□ 0.29
ATG4DQ86TL0 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
ATG4DQ86TL0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATG4DQ86TL0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.87■□□□□ 0.29
ATG4DQ86TL0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.87■□□□□ 0.29
ATG4DQ86TL0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATG4DQ86TL0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.87■□□□□ 0.29
ATG4DQ86TL0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATG4DQ86TL0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
ATG4DQ86TL0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ATG4DQ86TL0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATG4DQ86TL0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.87■□□□□ 0.29
ATG4DQ86TL0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.87■□□□□ 0.29
ATG4DQ86TL0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ATG4DQ86TL0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATG4DQ86TL0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATG4DQ86TL0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATG4DQ86TL0 AC036111.1-201ENST00000533973 1582 ntBASIC16.86■□□□□ 0.29
ATG4DQ86TL0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ATG4DQ86TL0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATG4DQ86TL0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATG4DQ86TL0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATG4DQ86TL0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
ATG4DQ86TL0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATG4DQ86TL0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATG4DQ86TL0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.86■□□□□ 0.29
ATG4DQ86TL0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.86■□□□□ 0.29
ATG4DQ86TL0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
ATG4DQ86TL0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
ATG4DQ86TL0 AC116562.4-202ENST00000641738 218 ntBASIC16.86■□□□□ 0.29
ATG4DQ86TL0 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATG4DQ86TL0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ATG4DQ86TL0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.86■□□□□ 0.29
ATG4DQ86TL0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATG4DQ86TL0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.86■□□□□ 0.29
ATG4DQ86TL0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.86■□□□□ 0.29
ATG4DQ86TL0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ATG4DQ86TL0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATG4DQ86TL0 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ATG4DQ86TL0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.86■□□□□ 0.29
ATG4DQ86TL0 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATG4DQ86TL0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
ATG4DQ86TL0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATG4DQ86TL0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms