Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 ANO7L1-203ENST00000602586 1720 ntBASIC12□□□□□ -0.49
MRPL55Q7Z7F7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
MRPL55Q7Z7F7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 AC133681.1-201ENST00000465482 601 ntBASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 AP002982.1-201ENST00000492365 877 ntBASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 AC124016.1-201ENST00000609552 612 ntBASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 AL445675.2-201ENST00000620291 557 ntBASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 KATNBL1P6-202ENST00000562413 1466 ntBASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 KRT8P41-201ENST00000533985 1514 ntBASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 NEFHP1-201ENST00000412845 2629 ntBASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
MRPL55Q7Z7F7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 SERF2-207ENST00000409614 582 ntTSL 2 BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 AC006058.3-201ENST00000606217 1069 ntBASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 AC104581.1-202ENST00000635932 2618 ntBASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
MRPL55Q7Z7F7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms