Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHFQ7M4L6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHFQ7M4L6 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
SHFQ7M4L6 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
SHFQ7M4L6 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHFQ7M4L6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHFQ7M4L6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SHFQ7M4L6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHFQ7M4L6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SHFQ7M4L6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHFQ7M4L6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHFQ7M4L6 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHFQ7M4L6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHFQ7M4L6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHFQ7M4L6 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHFQ7M4L6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SHFQ7M4L6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHFQ7M4L6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHFQ7M4L6 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SHFQ7M4L6 KRT17P3-201ENST00000420566 1262 ntBASIC16.84■□□□□ 0.29
SHFQ7M4L6 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.84■□□□□ 0.29
SHFQ7M4L6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
SHFQ7M4L6 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.84■□□□□ 0.29
SHFQ7M4L6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SHFQ7M4L6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SHFQ7M4L6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.84■□□□□ 0.29
SHFQ7M4L6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHFQ7M4L6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SHFQ7M4L6 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHFQ7M4L6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHFQ7M4L6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHFQ7M4L6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHFQ7M4L6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.84■□□□□ 0.29
SHFQ7M4L6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SHFQ7M4L6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHFQ7M4L6 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.84■□□□□ 0.29
SHFQ7M4L6 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
SHFQ7M4L6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
SHFQ7M4L6 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SHFQ7M4L6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
SHFQ7M4L6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
SHFQ7M4L6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
SHFQ7M4L6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHFQ7M4L6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHFQ7M4L6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHFQ7M4L6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHFQ7M4L6 AC135776.1-201ENST00000319817 2481 ntBASIC16.83■□□□□ 0.28
SHFQ7M4L6 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SHFQ7M4L6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.83■□□□□ 0.28
SHFQ7M4L6 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHFQ7M4L6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
SHFQ7M4L6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SHFQ7M4L6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.83■□□□□ 0.28
SHFQ7M4L6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.83■□□□□ 0.28
SHFQ7M4L6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.83■□□□□ 0.28
SHFQ7M4L6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SHFQ7M4L6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.83■□□□□ 0.28
SHFQ7M4L6 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.83■□□□□ 0.28
SHFQ7M4L6 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.83■□□□□ 0.28
SHFQ7M4L6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.83■□□□□ 0.28
SHFQ7M4L6 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.83■□□□□ 0.28
SHFQ7M4L6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SHFQ7M4L6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.83■□□□□ 0.28
SHFQ7M4L6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHFQ7M4L6 HEIH-201ENST00000623091 1652 ntBASIC16.83■□□□□ 0.28
SHFQ7M4L6 HLA-A-209ENST00000638375 975 ntBASIC16.83■□□□□ 0.28
SHFQ7M4L6 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.83■□□□□ 0.28
SHFQ7M4L6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHFQ7M4L6 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SHFQ7M4L6 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.82■□□□□ 0.28
SHFQ7M4L6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SHFQ7M4L6 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SHFQ7M4L6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHFQ7M4L6 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SHFQ7M4L6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SHFQ7M4L6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.82■□□□□ 0.28
SHFQ7M4L6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SHFQ7M4L6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.82■□□□□ 0.28
SHFQ7M4L6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
SHFQ7M4L6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHFQ7M4L6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.82■□□□□ 0.28
SHFQ7M4L6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.82■□□□□ 0.28
SHFQ7M4L6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHFQ7M4L6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHFQ7M4L6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHFQ7M4L6 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SHFQ7M4L6 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHFQ7M4L6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHFQ7M4L6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.82■□□□□ 0.28
SHFQ7M4L6 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.82■□□□□ 0.28
SHFQ7M4L6 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.82■□□□□ 0.28
SHFQ7M4L6 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.82■□□□□ 0.28
SHFQ7M4L6 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SHFQ7M4L6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SHFQ7M4L6 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.82■□□□□ 0.28
SHFQ7M4L6 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.82■□□□□ 0.28
SHFQ7M4L6 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SHFQ7M4L6 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHFQ7M4L6 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.82■□□□□ 0.28
SHFQ7M4L6 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms