Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF111Q6ZNA4 MIR718-201ENST00000390190 70 ntBASIC18.09■□□□□ 0.49
RNF111Q6ZNA4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF111Q6ZNA4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.09■□□□□ 0.49
RNF111Q6ZNA4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF111Q6ZNA4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.09■□□□□ 0.49
RNF111Q6ZNA4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF111Q6ZNA4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF111Q6ZNA4 AC073592.3-201ENST00000625118 1834 ntBASIC18.09■□□□□ 0.49
RNF111Q6ZNA4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF111Q6ZNA4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF111Q6ZNA4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
RNF111Q6ZNA4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF111Q6ZNA4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
RNF111Q6ZNA4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF111Q6ZNA4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF111Q6ZNA4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.08■□□□□ 0.49
RNF111Q6ZNA4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RNF111Q6ZNA4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF111Q6ZNA4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF111Q6ZNA4 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF111Q6ZNA4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RNF111Q6ZNA4 AC080080.1-201ENST00000625121 2420 ntBASIC18.08■□□□□ 0.49
RNF111Q6ZNA4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.08■□□□□ 0.49
RNF111Q6ZNA4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
RNF111Q6ZNA4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.08■□□□□ 0.48
RNF111Q6ZNA4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF111Q6ZNA4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF111Q6ZNA4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF111Q6ZNA4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF111Q6ZNA4 AC012618.2-201ENST00000428058 849 ntBASIC18.08■□□□□ 0.48
RNF111Q6ZNA4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF111Q6ZNA4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF111Q6ZNA4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.08■□□□□ 0.48
RNF111Q6ZNA4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.08■□□□□ 0.48
RNF111Q6ZNA4 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.08■□□□□ 0.48
RNF111Q6ZNA4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.08■□□□□ 0.48
RNF111Q6ZNA4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.08■□□□□ 0.48
RNF111Q6ZNA4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.08■□□□□ 0.48
RNF111Q6ZNA4 AF186192.3-201ENST00000583427 947 ntBASIC18.08■□□□□ 0.48
RNF111Q6ZNA4 AP001412.1-201ENST00000608405 714 ntBASIC18.08■□□□□ 0.48
RNF111Q6ZNA4 AL353708.3-201ENST00000610272 989 ntBASIC18.08■□□□□ 0.48
RNF111Q6ZNA4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF111Q6ZNA4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.08■□□□□ 0.48
RNF111Q6ZNA4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF111Q6ZNA4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF111Q6ZNA4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 AC134043.2-201ENST00000624206 2238 ntBASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 RPS2P55-201ENST00000397318 883 ntBASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 NIFKP9-201ENST00000419265 221 ntBASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 AC107956.1-201ENST00000494359 873 ntBASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF111Q6ZNA4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 AC124067.4-201ENST00000519691 2379 ntBASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 AC020763.4-201ENST00000623414 4170 ntBASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.06■□□□□ 0.48
RNF111Q6ZNA4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms