Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.71■□□□□ 0.91
SWSAP1Q6NVH7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SWSAP1Q6NVH7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SWSAP1Q6NVH7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SWSAP1Q6NVH7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SWSAP1Q6NVH7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SWSAP1Q6NVH7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SWSAP1Q6NVH7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.71■□□□□ 0.91
SWSAP1Q6NVH7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SWSAP1Q6NVH7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SWSAP1Q6NVH7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.71■□□□□ 0.91
SWSAP1Q6NVH7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SWSAP1Q6NVH7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.71■□□□□ 0.91
SWSAP1Q6NVH7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
SWSAP1Q6NVH7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.71■□□□□ 0.91
SWSAP1Q6NVH7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.71■□□□□ 0.91
SWSAP1Q6NVH7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.71■□□□□ 0.91
SWSAP1Q6NVH7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.71■□□□□ 0.91
SWSAP1Q6NVH7 MIR3180-4-201ENST00000582223 153 ntBASIC20.71■□□□□ 0.91
SWSAP1Q6NVH7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.71■□□□□ 0.91
SWSAP1Q6NVH7 AC093458.2-201ENST00000623150 629 ntBASIC20.71■□□□□ 0.91
SWSAP1Q6NVH7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SWSAP1Q6NVH7 AC120498.9-201ENST00000339021 3867 ntBASIC20.71■□□□□ 0.91
SWSAP1Q6NVH7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SWSAP1Q6NVH7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.71■□□□□ 0.91
SWSAP1Q6NVH7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SWSAP1Q6NVH7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SWSAP1Q6NVH7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SWSAP1Q6NVH7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SWSAP1Q6NVH7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SWSAP1Q6NVH7 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SWSAP1Q6NVH7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SWSAP1Q6NVH7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SWSAP1Q6NVH7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.7■□□□□ 0.9
SWSAP1Q6NVH7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SWSAP1Q6NVH7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SWSAP1Q6NVH7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SWSAP1Q6NVH7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SWSAP1Q6NVH7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SWSAP1Q6NVH7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SWSAP1Q6NVH7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SWSAP1Q6NVH7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SWSAP1Q6NVH7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.7■□□□□ 0.9
SWSAP1Q6NVH7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SWSAP1Q6NVH7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.7■□□□□ 0.9
SWSAP1Q6NVH7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SWSAP1Q6NVH7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.7■□□□□ 0.9
SWSAP1Q6NVH7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SWSAP1Q6NVH7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SWSAP1Q6NVH7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SWSAP1Q6NVH7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SWSAP1Q6NVH7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SWSAP1Q6NVH7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.69■□□□□ 0.9
SWSAP1Q6NVH7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SWSAP1Q6NVH7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SWSAP1Q6NVH7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SWSAP1Q6NVH7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SWSAP1Q6NVH7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SWSAP1Q6NVH7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.69■□□□□ 0.9
SWSAP1Q6NVH7 KRT18P41-201ENST00000518924 1277 ntBASIC20.69■□□□□ 0.9
SWSAP1Q6NVH7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.69■□□□□ 0.9
SWSAP1Q6NVH7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SWSAP1Q6NVH7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.69■□□□□ 0.9
SWSAP1Q6NVH7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.69■□□□□ 0.9
SWSAP1Q6NVH7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SWSAP1Q6NVH7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SWSAP1Q6NVH7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SWSAP1Q6NVH7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SWSAP1Q6NVH7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SWSAP1Q6NVH7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SWSAP1Q6NVH7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SWSAP1Q6NVH7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SWSAP1Q6NVH7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SWSAP1Q6NVH7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SWSAP1Q6NVH7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SWSAP1Q6NVH7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SWSAP1Q6NVH7 AL162741.1-201ENST00000565563 1558 ntBASIC20.68■□□□□ 0.9
SWSAP1Q6NVH7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SWSAP1Q6NVH7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SWSAP1Q6NVH7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SWSAP1Q6NVH7 MIR662-201ENST00000384847 95 ntBASIC20.68■□□□□ 0.9
SWSAP1Q6NVH7 PVRIG2P-201ENST00000435460 978 ntBASIC20.68■□□□□ 0.9
SWSAP1Q6NVH7 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SWSAP1Q6NVH7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.68■□□□□ 0.9
SWSAP1Q6NVH7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SWSAP1Q6NVH7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SWSAP1Q6NVH7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SWSAP1Q6NVH7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SWSAP1Q6NVH7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SWSAP1Q6NVH7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
SWSAP1Q6NVH7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.68■□□□□ 0.9
SWSAP1Q6NVH7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SWSAP1Q6NVH7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.68■□□□□ 0.9
SWSAP1Q6NVH7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SWSAP1Q6NVH7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SWSAP1Q6NVH7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.67■□□□□ 0.9
SWSAP1Q6NVH7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SWSAP1Q6NVH7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SWSAP1Q6NVH7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.67■□□□□ 0.9
SWSAP1Q6NVH7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms