Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 AC020916.1-201ENST00000587762 1774 ntBASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RUNDC3AQ59EK9 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 FZD10-202ENST00000539839 3282 ntBASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 AC008556.1-201ENST00000610908 2040 ntBASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 LTB4R2-202ENST00000528054 3092 ntBASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RUNDC3AQ59EK9 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RUNDC3AQ59EK9 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RUNDC3AQ59EK9 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RUNDC3AQ59EK9 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RUNDC3AQ59EK9 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RUNDC3AQ59EK9 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RUNDC3AQ59EK9 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.59■□□□□ 0.41
RUNDC3AQ59EK9 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.59■□□□□ 0.41
RUNDC3AQ59EK9 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RUNDC3AQ59EK9 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RUNDC3AQ59EK9 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RUNDC3AQ59EK9 AC026366.1-201ENST00000488803 879 ntBASIC17.59■□□□□ 0.41
RUNDC3AQ59EK9 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RUNDC3AQ59EK9 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RUNDC3AQ59EK9 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.59■□□□□ 0.41
RUNDC3AQ59EK9 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RUNDC3AQ59EK9 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RUNDC3AQ59EK9 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
RUNDC3AQ59EK9 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RUNDC3AQ59EK9 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RUNDC3AQ59EK9 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RUNDC3AQ59EK9 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RUNDC3AQ59EK9 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RUNDC3AQ59EK9 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RUNDC3AQ59EK9 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RUNDC3AQ59EK9 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
RUNDC3AQ59EK9 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RUNDC3AQ59EK9 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.58■□□□□ 0.41
RUNDC3AQ59EK9 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
RUNDC3AQ59EK9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
RUNDC3AQ59EK9 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.58■□□□□ 0.41
RUNDC3AQ59EK9 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.58■□□□□ 0.41
RUNDC3AQ59EK9 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RUNDC3AQ59EK9 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RUNDC3AQ59EK9 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RUNDC3AQ59EK9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.58■□□□□ 0.41
RUNDC3AQ59EK9 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RUNDC3AQ59EK9 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
RUNDC3AQ59EK9 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
RUNDC3AQ59EK9 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.58■□□□□ 0.41
RUNDC3AQ59EK9 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RUNDC3AQ59EK9 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RUNDC3AQ59EK9 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RUNDC3AQ59EK9 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.58■□□□□ 0.4
RUNDC3AQ59EK9 SLC25A6P5-201ENST00000435663 894 ntBASIC17.58■□□□□ 0.4
RUNDC3AQ59EK9 AC091390.4-202ENST00000476426 537 ntBASIC17.58■□□□□ 0.4
RUNDC3AQ59EK9 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RUNDC3AQ59EK9 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.58■□□□□ 0.4
RUNDC3AQ59EK9 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
RUNDC3AQ59EK9 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.58■□□□□ 0.4
RUNDC3AQ59EK9 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RUNDC3AQ59EK9 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.58■□□□□ 0.4
RUNDC3AQ59EK9 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RUNDC3AQ59EK9 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms