Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LONRF3Q496Y0 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.18■□□□□ 0.98
LONRF3Q496Y0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.18■□□□□ 0.98
LONRF3Q496Y0 AC018470.1-201ENST00000624790 3129 ntBASIC21.18■□□□□ 0.98
LONRF3Q496Y0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LONRF3Q496Y0 KRT8P3-201ENST00000519669 1449 ntBASIC21.18■□□□□ 0.98
LONRF3Q496Y0 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.18■□□□□ 0.98
LONRF3Q496Y0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.18■□□□□ 0.98
LONRF3Q496Y0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
LONRF3Q496Y0 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.18■□□□□ 0.98
LONRF3Q496Y0 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LONRF3Q496Y0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LONRF3Q496Y0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.18■□□□□ 0.98
LONRF3Q496Y0 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LONRF3Q496Y0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
LONRF3Q496Y0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LONRF3Q496Y0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LONRF3Q496Y0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LONRF3Q496Y0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LONRF3Q496Y0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LONRF3Q496Y0 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LONRF3Q496Y0 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LONRF3Q496Y0 AC004951.3-201ENST00000418645 1148 ntBASIC21.17■□□□□ 0.98
LONRF3Q496Y0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.17■□□□□ 0.98
LONRF3Q496Y0 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.17■□□□□ 0.98
LONRF3Q496Y0 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
LONRF3Q496Y0 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LONRF3Q496Y0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LONRF3Q496Y0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.17■□□□□ 0.98
LONRF3Q496Y0 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LONRF3Q496Y0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LONRF3Q496Y0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LONRF3Q496Y0 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LONRF3Q496Y0 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LONRF3Q496Y0 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
LONRF3Q496Y0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.17■□□□□ 0.98
LONRF3Q496Y0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LONRF3Q496Y0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LONRF3Q496Y0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LONRF3Q496Y0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LONRF3Q496Y0 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LONRF3Q496Y0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LONRF3Q496Y0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LONRF3Q496Y0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LONRF3Q496Y0 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LONRF3Q496Y0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
LONRF3Q496Y0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.16■□□□□ 0.98
LONRF3Q496Y0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LONRF3Q496Y0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LONRF3Q496Y0 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LONRF3Q496Y0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LONRF3Q496Y0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LONRF3Q496Y0 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LONRF3Q496Y0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LONRF3Q496Y0 INGX-201ENST00000359239 846 ntBASIC21.16■□□□□ 0.98
LONRF3Q496Y0 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.16■□□□□ 0.98
LONRF3Q496Y0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.16■□□□□ 0.98
LONRF3Q496Y0 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.16■□□□□ 0.98
LONRF3Q496Y0 AC026271.3-201ENST00000571884 352 ntBASIC21.16■□□□□ 0.98
LONRF3Q496Y0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.16■□□□□ 0.98
LONRF3Q496Y0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.16■□□□□ 0.98
LONRF3Q496Y0 AC011298.2-201ENST00000617989 482 ntBASIC21.16■□□□□ 0.98
LONRF3Q496Y0 AC130371.2-201ENST00000619443 611 ntBASIC21.16■□□□□ 0.98
LONRF3Q496Y0 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
LONRF3Q496Y0 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
LONRF3Q496Y0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
LONRF3Q496Y0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LONRF3Q496Y0 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.16■□□□□ 0.98
LONRF3Q496Y0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
LONRF3Q496Y0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LONRF3Q496Y0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.15■□□□□ 0.98
LONRF3Q496Y0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
LONRF3Q496Y0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
LONRF3Q496Y0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LONRF3Q496Y0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LONRF3Q496Y0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.15■□□□□ 0.98
LONRF3Q496Y0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.15■□□□□ 0.98
LONRF3Q496Y0 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LONRF3Q496Y0 KRT18P22-201ENST00000402024 1347 ntBASIC21.15■□□□□ 0.98
LONRF3Q496Y0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
LONRF3Q496Y0 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
LONRF3Q496Y0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
LONRF3Q496Y0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
LONRF3Q496Y0 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LONRF3Q496Y0 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LONRF3Q496Y0 ECEL1P2-202ENST00000465689 757 ntBASIC21.15■□□□□ 0.98
LONRF3Q496Y0 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.15■□□□□ 0.98
LONRF3Q496Y0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LONRF3Q496Y0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
LONRF3Q496Y0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.15■□□□□ 0.98
LONRF3Q496Y0 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.15■□□□□ 0.98
LONRF3Q496Y0 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
LONRF3Q496Y0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LONRF3Q496Y0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
LONRF3Q496Y0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LONRF3Q496Y0 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
LONRF3Q496Y0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LONRF3Q496Y0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LONRF3Q496Y0 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.15■□□□□ 0.98
LONRF3Q496Y0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms