Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ERCC6LQ2NKX8 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC6LQ2NKX8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
ERCC6LQ2NKX8 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC6LQ2NKX8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC6LQ2NKX8 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.72■□□□□ 0.75
ERCC6LQ2NKX8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ERCC6LQ2NKX8 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC6LQ2NKX8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC6LQ2NKX8 AC011270.2-201ENST00000624293 2550 ntBASIC19.72■□□□□ 0.75
ERCC6LQ2NKX8 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ERCC6LQ2NKX8 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
ERCC6LQ2NKX8 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 CYP2T3P-201ENST00000601990 817 ntBASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 CICP6-201ENST00000457191 2729 ntBASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ERCC6LQ2NKX8 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC6LQ2NKX8 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC6LQ2NKX8 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.7■□□□□ 0.74
ERCC6LQ2NKX8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ERCC6LQ2NKX8 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC6LQ2NKX8 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC6LQ2NKX8 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC6LQ2NKX8 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.7■□□□□ 0.74
ERCC6LQ2NKX8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.7■□□□□ 0.74
ERCC6LQ2NKX8 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.7■□□□□ 0.74
ERCC6LQ2NKX8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.7■□□□□ 0.74
ERCC6LQ2NKX8 AC007322.4-201ENST00000509611 723 ntBASIC19.7■□□□□ 0.74
ERCC6LQ2NKX8 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.7■□□□□ 0.74
ERCC6LQ2NKX8 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC6LQ2NKX8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC6LQ2NKX8 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC6LQ2NKX8 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC6LQ2NKX8 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC6LQ2NKX8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.7■□□□□ 0.74
ERCC6LQ2NKX8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.7■□□□□ 0.74
ERCC6LQ2NKX8 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ERCC6LQ2NKX8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ERCC6LQ2NKX8 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ERCC6LQ2NKX8 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.7■□□□□ 0.74
ERCC6LQ2NKX8 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
ERCC6LQ2NKX8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.69■□□□□ 0.74
ERCC6LQ2NKX8 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.69■□□□□ 0.74
ERCC6LQ2NKX8 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC6LQ2NKX8 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC6LQ2NKX8 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.69■□□□□ 0.74
ERCC6LQ2NKX8 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC6LQ2NKX8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC6LQ2NKX8 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC6LQ2NKX8 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC6LQ2NKX8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC6LQ2NKX8 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC6LQ2NKX8 AL355472.2-201ENST00000422958 438 ntBASIC19.69■□□□□ 0.74
ERCC6LQ2NKX8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ERCC6LQ2NKX8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC6LQ2NKX8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC6LQ2NKX8 MTMR9LP-203ENST00000426597 1545 ntBASIC19.69■□□□□ 0.74
ERCC6LQ2NKX8 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.69■□□□□ 0.74
ERCC6LQ2NKX8 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC6LQ2NKX8 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.69■□□□□ 0.74
ERCC6LQ2NKX8 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC6LQ2NKX8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.69■□□□□ 0.74
ERCC6LQ2NKX8 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.69■□□□□ 0.74
ERCC6LQ2NKX8 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ERCC6LQ2NKX8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC6LQ2NKX8 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.68■□□□□ 0.74
ERCC6LQ2NKX8 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC6LQ2NKX8 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC6LQ2NKX8 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ERCC6LQ2NKX8 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms