Protein–RNA interactions for Protein: Q01804

OTUD4, OTU domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4Q01804 AC113410.3-201ENST00000623366 203 ntBASIC19.25■□□□□ 0.67
OTUD4Q01804 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
OTUD4Q01804 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
OTUD4Q01804 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
OTUD4Q01804 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.25■□□□□ 0.67
OTUD4Q01804 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.25■□□□□ 0.67
OTUD4Q01804 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
OTUD4Q01804 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
OTUD4Q01804 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
OTUD4Q01804 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.24■□□□□ 0.67
OTUD4Q01804 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
OTUD4Q01804 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
OTUD4Q01804 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
OTUD4Q01804 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
OTUD4Q01804 AL109659.2-201ENST00000606809 1674 ntBASIC19.24■□□□□ 0.67
OTUD4Q01804 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
OTUD4Q01804 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
OTUD4Q01804 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
OTUD4Q01804 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
OTUD4Q01804 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
OTUD4Q01804 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
OTUD4Q01804 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
OTUD4Q01804 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
OTUD4Q01804 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
OTUD4Q01804 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.24■□□□□ 0.67
OTUD4Q01804 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
OTUD4Q01804 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.24■□□□□ 0.67
OTUD4Q01804 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.24■□□□□ 0.67
OTUD4Q01804 MFAP1P1-201ENST00000442257 1255 ntBASIC19.24■□□□□ 0.67
OTUD4Q01804 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.24■□□□□ 0.67
OTUD4Q01804 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.24■□□□□ 0.67
OTUD4Q01804 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.24■□□□□ 0.67
OTUD4Q01804 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.24■□□□□ 0.67
OTUD4Q01804 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.24■□□□□ 0.67
OTUD4Q01804 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.24■□□□□ 0.67
OTUD4Q01804 DGCR10-201ENST00000609839 495 ntBASIC19.24■□□□□ 0.67
OTUD4Q01804 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
OTUD4Q01804 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
OTUD4Q01804 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
OTUD4Q01804 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
OTUD4Q01804 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
OTUD4Q01804 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
OTUD4Q01804 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
OTUD4Q01804 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
OTUD4Q01804 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
OTUD4Q01804 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
OTUD4Q01804 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
OTUD4Q01804 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
OTUD4Q01804 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
OTUD4Q01804 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
OTUD4Q01804 AL162741.1-201ENST00000565563 1558 ntBASIC19.23■□□□□ 0.67
OTUD4Q01804 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.23■□□□□ 0.67
OTUD4Q01804 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.23■□□□□ 0.67
OTUD4Q01804 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.23■□□□□ 0.67
OTUD4Q01804 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
OTUD4Q01804 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
OTUD4Q01804 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
OTUD4Q01804 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
OTUD4Q01804 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
OTUD4Q01804 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
OTUD4Q01804 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
OTUD4Q01804 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
OTUD4Q01804 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
OTUD4Q01804 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.23■□□□□ 0.67
OTUD4Q01804 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.23■□□□□ 0.67
OTUD4Q01804 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
OTUD4Q01804 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.23■□□□□ 0.67
OTUD4Q01804 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.23■□□□□ 0.67
OTUD4Q01804 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.23■□□□□ 0.67
OTUD4Q01804 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.23■□□□□ 0.67
OTUD4Q01804 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
OTUD4Q01804 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.23■□□□□ 0.67
OTUD4Q01804 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.23■□□□□ 0.67
OTUD4Q01804 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
OTUD4Q01804 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
OTUD4Q01804 AL133373.2-201ENST00000623187 2828 ntBASIC19.23■□□□□ 0.67
OTUD4Q01804 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
OTUD4Q01804 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.23■□□□□ 0.67
OTUD4Q01804 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
OTUD4Q01804 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.22■□□□□ 0.67
OTUD4Q01804 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
OTUD4Q01804 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
OTUD4Q01804 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
OTUD4Q01804 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
OTUD4Q01804 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
OTUD4Q01804 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.22■□□□□ 0.67
OTUD4Q01804 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
OTUD4Q01804 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.22■□□□□ 0.67
OTUD4Q01804 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
OTUD4Q01804 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
OTUD4Q01804 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
OTUD4Q01804 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.22■□□□□ 0.67
OTUD4Q01804 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
OTUD4Q01804 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.22■□□□□ 0.67
OTUD4Q01804 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
OTUD4Q01804 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.22■□□□□ 0.67
OTUD4Q01804 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
OTUD4Q01804 AC012618.2-201ENST00000428058 849 ntBASIC19.22■□□□□ 0.67
OTUD4Q01804 AC233702.5-201ENST00000584107 538 ntBASIC19.22■□□□□ 0.67
OTUD4Q01804 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms