Protein–RNA interactions for Protein: P98155

VLDLR, Very low-density lipoprotein receptor, humanhuman

Predictions only

Length 873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLRP98155 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.4■□□□□ 0.38
VLDLRP98155 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VLDLRP98155 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VLDLRP98155 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
VLDLRP98155 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VLDLRP98155 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.4■□□□□ 0.38
VLDLRP98155 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
VLDLRP98155 AL158047.1-201ENST00000445918 881 ntBASIC17.4■□□□□ 0.38
VLDLRP98155 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.4■□□□□ 0.38
VLDLRP98155 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.4■□□□□ 0.38
VLDLRP98155 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.4■□□□□ 0.38
VLDLRP98155 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.4■□□□□ 0.38
VLDLRP98155 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
VLDLRP98155 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VLDLRP98155 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.4■□□□□ 0.38
VLDLRP98155 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
VLDLRP98155 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VLDLRP98155 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VLDLRP98155 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VLDLRP98155 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VLDLRP98155 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VLDLRP98155 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
VLDLRP98155 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VLDLRP98155 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
VLDLRP98155 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.39■□□□□ 0.38
VLDLRP98155 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
VLDLRP98155 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
VLDLRP98155 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VLDLRP98155 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VLDLRP98155 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VLDLRP98155 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
VLDLRP98155 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VLDLRP98155 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VLDLRP98155 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VLDLRP98155 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VLDLRP98155 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VLDLRP98155 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
VLDLRP98155 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.39■□□□□ 0.37
VLDLRP98155 AC026366.1-201ENST00000488803 879 ntBASIC17.39■□□□□ 0.37
VLDLRP98155 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.39■□□□□ 0.37
VLDLRP98155 UNC93B5-201ENST00000530315 699 ntBASIC17.39■□□□□ 0.37
VLDLRP98155 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.39■□□□□ 0.37
VLDLRP98155 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VLDLRP98155 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
VLDLRP98155 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.39■□□□□ 0.37
VLDLRP98155 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.39■□□□□ 0.37
VLDLRP98155 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.39■□□□□ 0.37
VLDLRP98155 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.39■□□□□ 0.37
VLDLRP98155 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.39■□□□□ 0.37
VLDLRP98155 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VLDLRP98155 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.39■□□□□ 0.37
VLDLRP98155 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VLDLRP98155 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
VLDLRP98155 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VLDLRP98155 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
VLDLRP98155 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VLDLRP98155 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VLDLRP98155 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VLDLRP98155 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.39■□□□□ 0.37
VLDLRP98155 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VLDLRP98155 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VLDLRP98155 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VLDLRP98155 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
VLDLRP98155 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VLDLRP98155 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VLDLRP98155 AC020916.1-201ENST00000587762 1774 ntBASIC17.38■□□□□ 0.37
VLDLRP98155 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
VLDLRP98155 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
VLDLRP98155 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
VLDLRP98155 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VLDLRP98155 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
VLDLRP98155 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
VLDLRP98155 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VLDLRP98155 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VLDLRP98155 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.38■□□□□ 0.37
VLDLRP98155 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.38■□□□□ 0.37
VLDLRP98155 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.38■□□□□ 0.37
VLDLRP98155 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.38■□□□□ 0.37
VLDLRP98155 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.38■□□□□ 0.37
VLDLRP98155 RPS2P4-201ENST00000476944 856 ntBASIC17.38■□□□□ 0.37
VLDLRP98155 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VLDLRP98155 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.38■□□□□ 0.37
VLDLRP98155 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.38■□□□□ 0.37
VLDLRP98155 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VLDLRP98155 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VLDLRP98155 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.38■□□□□ 0.37
VLDLRP98155 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
VLDLRP98155 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VLDLRP98155 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VLDLRP98155 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.38■□□□□ 0.37
VLDLRP98155 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.38■□□□□ 0.37
VLDLRP98155 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
VLDLRP98155 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
VLDLRP98155 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.37■□□□□ 0.37
VLDLRP98155 NBPF21P-201ENST00000425093 1451 ntBASIC17.37■□□□□ 0.37
VLDLRP98155 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.37■□□□□ 0.37
VLDLRP98155 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VLDLRP98155 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VLDLRP98155 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VLDLRP98155 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms