Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.78■□□□□ 0.92
ASIC1P78348 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ASIC1P78348 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ASIC1P78348 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.78■□□□□ 0.92
ASIC1P78348 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.78■□□□□ 0.92
ASIC1P78348 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
ASIC1P78348 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ASIC1P78348 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.78■□□□□ 0.92
ASIC1P78348 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ASIC1P78348 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ASIC1P78348 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ASIC1P78348 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
ASIC1P78348 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ASIC1P78348 FITM1-202ENST00000559294 800 ntBASIC20.78■□□□□ 0.92
ASIC1P78348 MIR4674-201ENST00000582457 87 ntBASIC20.78■□□□□ 0.92
ASIC1P78348 MIR4497-201ENST00000583208 89 ntBASIC20.78■□□□□ 0.92
ASIC1P78348 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ASIC1P78348 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ASIC1P78348 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ASIC1P78348 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ASIC1P78348 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ASIC1P78348 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ASIC1P78348 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ASIC1P78348 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ASIC1P78348 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.78■□□□□ 0.92
ASIC1P78348 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ASIC1P78348 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ASIC1P78348 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ASIC1P78348 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
ASIC1P78348 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ASIC1P78348 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ASIC1P78348 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ASIC1P78348 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
ASIC1P78348 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
ASIC1P78348 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ASIC1P78348 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
ASIC1P78348 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ASIC1P78348 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ASIC1P78348 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.77■□□□□ 0.92
ASIC1P78348 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.77■□□□□ 0.92
ASIC1P78348 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ASIC1P78348 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ASIC1P78348 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.77■□□□□ 0.92
ASIC1P78348 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.77■□□□□ 0.92
ASIC1P78348 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.77■□□□□ 0.92
ASIC1P78348 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.77■□□□□ 0.92
ASIC1P78348 MYC-208ENST00000641036 567 ntBASIC20.77■□□□□ 0.92
ASIC1P78348 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ASIC1P78348 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ASIC1P78348 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ASIC1P78348 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
ASIC1P78348 KRT8P45-201ENST00000414328 1447 ntBASIC20.77■□□□□ 0.91
ASIC1P78348 AC112777.1-201ENST00000540175 1423 ntBASIC20.77■□□□□ 0.91
ASIC1P78348 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ASIC1P78348 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ASIC1P78348 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.77■□□□□ 0.91
ASIC1P78348 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.77■□□□□ 0.91
ASIC1P78348 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
ASIC1P78348 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ASIC1P78348 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ASIC1P78348 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ASIC1P78348 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.76■□□□□ 0.91
ASIC1P78348 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ASIC1P78348 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ASIC1P78348 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.76■□□□□ 0.91
ASIC1P78348 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ASIC1P78348 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ASIC1P78348 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.76■□□□□ 0.91
ASIC1P78348 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
ASIC1P78348 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
ASIC1P78348 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
ASIC1P78348 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.76■□□□□ 0.91
ASIC1P78348 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.76■□□□□ 0.91
ASIC1P78348 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
ASIC1P78348 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.76■□□□□ 0.91
ASIC1P78348 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.76■□□□□ 0.91
ASIC1P78348 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ASIC1P78348 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ASIC1P78348 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ASIC1P78348 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ASIC1P78348 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ASIC1P78348 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ASIC1P78348 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.76■□□□□ 0.91
ASIC1P78348 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ASIC1P78348 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
ASIC1P78348 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.75■□□□□ 0.91
ASIC1P78348 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ASIC1P78348 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.75■□□□□ 0.91
ASIC1P78348 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.75■□□□□ 0.91
ASIC1P78348 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ASIC1P78348 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ASIC1P78348 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ASIC1P78348 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ASIC1P78348 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ASIC1P78348 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ASIC1P78348 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.75■□□□□ 0.91
ASIC1P78348 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ASIC1P78348 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ASIC1P78348 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.75■□□□□ 0.91
ASIC1P78348 TSPY15P-201ENST00000457163 923 ntBASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms