Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CDH12P55289 AC133681.1-201ENST00000465482 601 ntBASIC17.37■□□□□ 0.37
CDH12P55289 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.37■□□□□ 0.37
CDH12P55289 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH12P55289 AC006058.3-201ENST00000606217 1069 ntBASIC17.37■□□□□ 0.37
CDH12P55289 AC110285.5-201ENST00000611501 352 ntBASIC17.37■□□□□ 0.37
CDH12P55289 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.37■□□□□ 0.37
CDH12P55289 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH12P55289 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH12P55289 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH12P55289 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CDH12P55289 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
CDH12P55289 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CDH12P55289 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH12P55289 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
CDH12P55289 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH12P55289 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
CDH12P55289 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH12P55289 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CDH12P55289 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH12P55289 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH12P55289 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH12P55289 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
CDH12P55289 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH12P55289 AL499627.1-201ENST00000569373 2188 ntBASIC17.36■□□□□ 0.37
CDH12P55289 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH12P55289 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH12P55289 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CDH12P55289 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.36■□□□□ 0.37
CDH12P55289 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.36■□□□□ 0.37
CDH12P55289 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH12P55289 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.36■□□□□ 0.37
CDH12P55289 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.36■□□□□ 0.37
CDH12P55289 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH12P55289 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CDH12P55289 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
CDH12P55289 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH12P55289 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH12P55289 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH12P55289 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH12P55289 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CDH12P55289 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH12P55289 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH12P55289 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH12P55289 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CDH12P55289 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH12P55289 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH12P55289 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH12P55289 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH12P55289 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH12P55289 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH12P55289 AP000997.3-201ENST00000623333 2250 ntBASIC17.35■□□□□ 0.37
CDH12P55289 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CDH12P55289 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH12P55289 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH12P55289 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH12P55289 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH12P55289 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CDH12P55289 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH12P55289 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH12P55289 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH12P55289 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH12P55289 Z85996.1-201ENST00000494644 937 ntBASIC17.35■□□□□ 0.37
CDH12P55289 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH12P55289 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.35■□□□□ 0.37
CDH12P55289 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH12P55289 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH12P55289 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH12P55289 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH12P55289 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.35■□□□□ 0.37
CDH12P55289 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH12P55289 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CDH12P55289 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH12P55289 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDH12P55289 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH12P55289 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CDH12P55289 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH12P55289 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH12P55289 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH12P55289 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH12P55289 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH12P55289 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH12P55289 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH12P55289 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH12P55289 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH12P55289 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH12P55289 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH12P55289 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
CDH12P55289 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.34■□□□□ 0.37
CDH12P55289 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH12P55289 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.34■□□□□ 0.37
CDH12P55289 RCC2P6-201ENST00000526625 1557 ntBASIC17.34■□□□□ 0.37
CDH12P55289 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDH12P55289 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH12P55289 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.34■□□□□ 0.37
CDH12P55289 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH12P55289 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.34■□□□□ 0.37
CDH12P55289 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
CDH12P55289 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDH12P55289 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms