Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC4P55056 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOC4P55056 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC13.66□□□□□ -0.22
APOC4P55056 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
APOC4P55056 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC13.65□□□□□ -0.22
APOC4P55056 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC4P55056 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOC4P55056 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOC4P55056 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
APOC4P55056 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC4P55056 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC4P55056 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
APOC4P55056 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC4P55056 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC4P55056 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
APOC4P55056 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC4P55056 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC4P55056 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC13.65□□□□□ -0.22
APOC4P55056 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
APOC4P55056 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
APOC4P55056 PCED1CP-201ENST00000419887 785 ntBASIC13.65□□□□□ -0.22
APOC4P55056 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC4P55056 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.65□□□□□ -0.22
APOC4P55056 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC13.65□□□□□ -0.22
APOC4P55056 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC13.65□□□□□ -0.22
APOC4P55056 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC4P55056 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
APOC4P55056 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
APOC4P55056 CLN6-214ENST00000636314 442 ntTSL 3 BASIC13.65□□□□□ -0.22
APOC4P55056 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC4P55056 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC13.65□□□□□ -0.22
APOC4P55056 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
APOC4P55056 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC4P55056 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC4P55056 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC4P55056 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC13.65□□□□□ -0.22
APOC4P55056 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC4P55056 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC13.65□□□□□ -0.22
APOC4P55056 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOC4P55056 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOC4P55056 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOC4P55056 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC4P55056 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC13.65□□□□□ -0.22
APOC4P55056 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC13.65□□□□□ -0.22
APOC4P55056 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOC4P55056 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOC4P55056 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.65□□□□□ -0.22
APOC4P55056 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
APOC4P55056 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
APOC4P55056 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.23
APOC4P55056 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOC4P55056 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
APOC4P55056 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC4P55056 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC13.64□□□□□ -0.23
APOC4P55056 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC4P55056 AC073130.3-201ENST00000624389 2278 ntBASIC13.64□□□□□ -0.23
APOC4P55056 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC13.64□□□□□ -0.23
APOC4P55056 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOC4P55056 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOC4P55056 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC13.64□□□□□ -0.23
APOC4P55056 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC4P55056 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC13.64□□□□□ -0.23
APOC4P55056 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC4P55056 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC4P55056 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.64□□□□□ -0.23
APOC4P55056 SPDYE15P-201ENST00000424157 909 ntBASIC13.64□□□□□ -0.23
APOC4P55056 UPK3BP1-201ENST00000428678 509 ntBASIC13.64□□□□□ -0.23
APOC4P55056 KRT18P38-201ENST00000449496 1282 ntBASIC13.64□□□□□ -0.23
APOC4P55056 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC4P55056 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC4P55056 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.64□□□□□ -0.23
APOC4P55056 AL136038.3-201ENST00000561909 1096 ntBASIC13.64□□□□□ -0.23
APOC4P55056 MIR3917-201ENST00000580971 93 ntBASIC13.64□□□□□ -0.23
APOC4P55056 MIR3180-4-201ENST00000582223 153 ntBASIC13.64□□□□□ -0.23
APOC4P55056 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC13.64□□□□□ -0.23
APOC4P55056 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC4P55056 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC4P55056 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC4P55056 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC4P55056 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOC4P55056 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
APOC4P55056 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC13.63□□□□□ -0.23
APOC4P55056 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC4P55056 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC4P55056 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APOC4P55056 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC13.63□□□□□ -0.23
APOC4P55056 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
APOC4P55056 AC007952.6-201ENST00000573168 2673 ntBASIC13.63□□□□□ -0.23
APOC4P55056 AC003957.1-201ENST00000625108 2673 ntBASIC13.63□□□□□ -0.23
APOC4P55056 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC4P55056 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
APOC4P55056 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC4P55056 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC4P55056 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOC4P55056 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC13.63□□□□□ -0.23
APOC4P55056 SEC1P-202ENST00000473944 940 ntBASIC13.63□□□□□ -0.23
APOC4P55056 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APOC4P55056 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.63□□□□□ -0.23
APOC4P55056 AC104390.1-201ENST00000555663 520 ntBASIC13.63□□□□□ -0.23
APOC4P55056 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms