Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PSMD4P55036 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PSMD4P55036 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PSMD4P55036 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PSMD4P55036 RCC2P3-201ENST00000418112 1537 ntBASIC17.34■□□□□ 0.37
PSMD4P55036 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.34■□□□□ 0.37
PSMD4P55036 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.34■□□□□ 0.37
PSMD4P55036 EGLN1P1-201ENST00000531623 762 ntBASIC17.34■□□□□ 0.37
PSMD4P55036 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PSMD4P55036 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PSMD4P55036 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.34■□□□□ 0.37
PSMD4P55036 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
PSMD4P55036 AL353719.1-201ENST00000566847 864 ntBASIC17.34■□□□□ 0.37
PSMD4P55036 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PSMD4P55036 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PSMD4P55036 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.34■□□□□ 0.37
PSMD4P55036 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.34■□□□□ 0.37
PSMD4P55036 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.34■□□□□ 0.37
PSMD4P55036 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PSMD4P55036 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PSMD4P55036 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PSMD4P55036 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
PSMD4P55036 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PSMD4P55036 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.33■□□□□ 0.37
PSMD4P55036 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
PSMD4P55036 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.33■□□□□ 0.37
PSMD4P55036 ANO7L1-203ENST00000602586 1720 ntBASIC17.33■□□□□ 0.37
PSMD4P55036 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.33■□□□□ 0.37
PSMD4P55036 AL109659.2-201ENST00000606809 1674 ntBASIC17.33■□□□□ 0.37
PSMD4P55036 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PSMD4P55036 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.33■□□□□ 0.37
PSMD4P55036 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.33■□□□□ 0.36
PSMD4P55036 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
PSMD4P55036 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.33■□□□□ 0.36
PSMD4P55036 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PSMD4P55036 MCCD1P1-208ENST00000445732 328 ntBASIC17.33■□□□□ 0.36
PSMD4P55036 BX088651.1-201ENST00000540551 451 ntBASIC17.33■□□□□ 0.36
PSMD4P55036 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PSMD4P55036 AC010653.2-201ENST00000623505 997 ntBASIC17.33■□□□□ 0.36
PSMD4P55036 MYC-208ENST00000641036 567 ntBASIC17.33■□□□□ 0.36
PSMD4P55036 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PSMD4P55036 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PSMD4P55036 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PSMD4P55036 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
PSMD4P55036 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PSMD4P55036 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.33■□□□□ 0.36
PSMD4P55036 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.33■□□□□ 0.36
PSMD4P55036 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
PSMD4P55036 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PSMD4P55036 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.33■□□□□ 0.36
PSMD4P55036 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PSMD4P55036 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PSMD4P55036 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PSMD4P55036 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.32■□□□□ 0.36
PSMD4P55036 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.32■□□□□ 0.36
PSMD4P55036 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.32■□□□□ 0.36
PSMD4P55036 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PSMD4P55036 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PSMD4P55036 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PSMD4P55036 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.32■□□□□ 0.36
PSMD4P55036 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PSMD4P55036 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PSMD4P55036 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PSMD4P55036 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PSMD4P55036 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.32■□□□□ 0.36
PSMD4P55036 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.32■□□□□ 0.36
PSMD4P55036 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PSMD4P55036 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PSMD4P55036 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PSMD4P55036 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PSMD4P55036 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PSMD4P55036 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PSMD4P55036 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
PSMD4P55036 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PSMD4P55036 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PSMD4P55036 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PSMD4P55036 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.31■□□□□ 0.36
PSMD4P55036 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PSMD4P55036 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PSMD4P55036 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PSMD4P55036 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PSMD4P55036 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PSMD4P55036 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
PSMD4P55036 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PSMD4P55036 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PSMD4P55036 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PSMD4P55036 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PSMD4P55036 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PSMD4P55036 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.31■□□□□ 0.36
PSMD4P55036 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PSMD4P55036 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.31■□□□□ 0.36
PSMD4P55036 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.31■□□□□ 0.36
PSMD4P55036 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PSMD4P55036 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PSMD4P55036 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.31■□□□□ 0.36
PSMD4P55036 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.31■□□□□ 0.36
PSMD4P55036 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PSMD4P55036 AL512604.3-201ENST00000569583 964 ntBASIC17.31■□□□□ 0.36
PSMD4P55036 AL023803.3-201ENST00000615559 522 ntBASIC17.31■□□□□ 0.36
PSMD4P55036 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms