Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATXN3P54252 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATXN3P54252 AC005332.8-201ENST00000622750 2735 ntBASIC19■□□□□ 0.63
ATXN3P54252 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATXN3P54252 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19■□□□□ 0.63
ATXN3P54252 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19■□□□□ 0.63
ATXN3P54252 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATXN3P54252 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
ATXN3P54252 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATXN3P54252 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19■□□□□ 0.63
ATXN3P54252 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19■□□□□ 0.63
ATXN3P54252 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATXN3P54252 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
ATXN3P54252 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.99■□□□□ 0.63
ATXN3P54252 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.99■□□□□ 0.63
ATXN3P54252 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATXN3P54252 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATXN3P54252 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATXN3P54252 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.99■□□□□ 0.63
ATXN3P54252 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.99■□□□□ 0.63
ATXN3P54252 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.99■□□□□ 0.63
ATXN3P54252 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.99■□□□□ 0.63
ATXN3P54252 AP003041.3-201ENST00000527151 707 ntBASIC18.99■□□□□ 0.63
ATXN3P54252 AL136038.3-201ENST00000561909 1096 ntBASIC18.99■□□□□ 0.63
ATXN3P54252 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATXN3P54252 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATXN3P54252 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATXN3P54252 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.99■□□□□ 0.63
ATXN3P54252 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.99■□□□□ 0.63
ATXN3P54252 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATXN3P54252 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
ATXN3P54252 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATXN3P54252 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATXN3P54252 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATXN3P54252 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATXN3P54252 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATXN3P54252 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATXN3P54252 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATXN3P54252 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.98■□□□□ 0.63
ATXN3P54252 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATXN3P54252 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.98■□□□□ 0.63
ATXN3P54252 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATXN3P54252 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.98■□□□□ 0.63
ATXN3P54252 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATXN3P54252 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.98■□□□□ 0.63
ATXN3P54252 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ATXN3P54252 AC112907.2-201ENST00000448639 330 ntBASIC18.98■□□□□ 0.63
ATXN3P54252 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATXN3P54252 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATXN3P54252 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.98■□□□□ 0.63
ATXN3P54252 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.98■□□□□ 0.63
ATXN3P54252 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.98■□□□□ 0.63
ATXN3P54252 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATXN3P54252 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
ATXN3P54252 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATXN3P54252 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.98■□□□□ 0.63
ATXN3P54252 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
ATXN3P54252 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATXN3P54252 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.98■□□□□ 0.63
ATXN3P54252 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATXN3P54252 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATXN3P54252 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.98■□□□□ 0.63
ATXN3P54252 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATXN3P54252 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATXN3P54252 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.97■□□□□ 0.63
ATXN3P54252 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.97■□□□□ 0.63
ATXN3P54252 FZD10-202ENST00000539839 3282 ntBASIC18.97■□□□□ 0.63
ATXN3P54252 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
ATXN3P54252 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATXN3P54252 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.97■□□□□ 0.63
ATXN3P54252 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.97■□□□□ 0.63
ATXN3P54252 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.97■□□□□ 0.63
ATXN3P54252 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.97■□□□□ 0.63
ATXN3P54252 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.97■□□□□ 0.63
ATXN3P54252 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATXN3P54252 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATXN3P54252 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.97■□□□□ 0.63
ATXN3P54252 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATXN3P54252 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATXN3P54252 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATXN3P54252 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3P54252 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3P54252 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3P54252 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3P54252 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3P54252 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.96■□□□□ 0.63
ATXN3P54252 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3P54252 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3P54252 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3P54252 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.96■□□□□ 0.63
ATXN3P54252 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3P54252 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.96■□□□□ 0.63
ATXN3P54252 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.96■□□□□ 0.63
ATXN3P54252 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.96■□□□□ 0.63
ATXN3P54252 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3P54252 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.96■□□□□ 0.63
ATXN3P54252 KRT18P38-201ENST00000449496 1282 ntBASIC18.96■□□□□ 0.63
ATXN3P54252 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATXN3P54252 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.96■□□□□ 0.63
ATXN3P54252 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms