Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 BX088651.1-201ENST00000540551 451 ntBASIC16.57■□□□□ 0.24
CSNK1A1P48729 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.57■□□□□ 0.24
CSNK1A1P48729 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.57■□□□□ 0.24
CSNK1A1P48729 MYC-208ENST00000641036 567 ntBASIC16.57■□□□□ 0.24
CSNK1A1P48729 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CSNK1A1P48729 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSNK1A1P48729 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.57■□□□□ 0.24
CSNK1A1P48729 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CSNK1A1P48729 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSNK1A1P48729 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSNK1A1P48729 WIZP1-201ENST00000531444 2299 ntBASIC16.57■□□□□ 0.24
CSNK1A1P48729 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CSNK1A1P48729 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.56■□□□□ 0.24
CSNK1A1P48729 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSNK1A1P48729 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSNK1A1P48729 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.56■□□□□ 0.24
CSNK1A1P48729 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CSNK1A1P48729 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CSNK1A1P48729 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSNK1A1P48729 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSNK1A1P48729 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CSNK1A1P48729 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.56■□□□□ 0.24
CSNK1A1P48729 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSNK1A1P48729 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CSNK1A1P48729 AC092338.2-201ENST00000568827 1415 ntBASIC16.56■□□□□ 0.24
CSNK1A1P48729 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.56■□□□□ 0.24
CSNK1A1P48729 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSNK1A1P48729 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.56■□□□□ 0.24
CSNK1A1P48729 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.56■□□□□ 0.24
CSNK1A1P48729 TSPY14P-201ENST00000303979 915 ntBASIC16.56■□□□□ 0.24
CSNK1A1P48729 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSNK1A1P48729 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.56■□□□□ 0.24
CSNK1A1P48729 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CSNK1A1P48729 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
CSNK1A1P48729 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.56■□□□□ 0.24
CSNK1A1P48729 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CSNK1A1P48729 AC128688.1-201ENST00000487626 519 ntBASIC16.56■□□□□ 0.24
CSNK1A1P48729 EGLN1P1-201ENST00000531623 762 ntBASIC16.56■□□□□ 0.24
CSNK1A1P48729 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.56■□□□□ 0.24
CSNK1A1P48729 MIR3180-5-201ENST00000583743 153 ntBASIC16.56■□□□□ 0.24
CSNK1A1P48729 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CSNK1A1P48729 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.56■□□□□ 0.24
CSNK1A1P48729 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.56■□□□□ 0.24
CSNK1A1P48729 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.56■□□□□ 0.24
CSNK1A1P48729 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.56■□□□□ 0.24
CSNK1A1P48729 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSNK1A1P48729 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CSNK1A1P48729 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSNK1A1P48729 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
CSNK1A1P48729 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CSNK1A1P48729 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CSNK1A1P48729 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.55■□□□□ 0.24
CSNK1A1P48729 KRT8P9-201ENST00000558927 1449 ntBASIC16.55■□□□□ 0.24
CSNK1A1P48729 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CSNK1A1P48729 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CSNK1A1P48729 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.55■□□□□ 0.24
CSNK1A1P48729 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.55■□□□□ 0.24
CSNK1A1P48729 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CSNK1A1P48729 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSNK1A1P48729 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSNK1A1P48729 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSNK1A1P48729 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.55■□□□□ 0.24
CSNK1A1P48729 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSNK1A1P48729 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.55■□□□□ 0.24
CSNK1A1P48729 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.55■□□□□ 0.24
CSNK1A1P48729 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.55■□□□□ 0.24
CSNK1A1P48729 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.55■□□□□ 0.24
CSNK1A1P48729 MIR4674-201ENST00000582457 87 ntBASIC16.55■□□□□ 0.24
CSNK1A1P48729 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CSNK1A1P48729 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSNK1A1P48729 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CSNK1A1P48729 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSNK1A1P48729 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSNK1A1P48729 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.55■□□□□ 0.24
CSNK1A1P48729 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSNK1A1P48729 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.55■□□□□ 0.24
CSNK1A1P48729 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CSNK1A1P48729 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
CSNK1A1P48729 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CSNK1A1P48729 CYP2D8P-201ENST00000433633 1490 ntBASIC16.54■□□□□ 0.24
CSNK1A1P48729 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CSNK1A1P48729 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CSNK1A1P48729 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CSNK1A1P48729 AC112777.1-201ENST00000540175 1423 ntBASIC16.54■□□□□ 0.24
CSNK1A1P48729 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.54■□□□□ 0.24
CSNK1A1P48729 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CSNK1A1P48729 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.54■□□□□ 0.24
CSNK1A1P48729 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CSNK1A1P48729 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CSNK1A1P48729 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CSNK1A1P48729 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CSNK1A1P48729 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CSNK1A1P48729 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CSNK1A1P48729 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CSNK1A1P48729 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CSNK1A1P48729 MIR564-202ENST00000385049 94 ntBASIC16.54■□□□□ 0.24
CSNK1A1P48729 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CSNK1A1P48729 AC007663.1-201ENST00000438948 1240 ntBASIC16.54■□□□□ 0.24
CSNK1A1P48729 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CSNK1A1P48729 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms