Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.79■□□□□ 0.76
BRCC3P46736 AC083906.6-201ENST00000641366 219 ntBASIC19.79■□□□□ 0.76
BRCC3P46736 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BRCC3P46736 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRCC3P46736 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRCC3P46736 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.79■□□□□ 0.76
BRCC3P46736 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
BRCC3P46736 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
BRCC3P46736 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
BRCC3P46736 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.79■□□□□ 0.76
BRCC3P46736 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.79■□□□□ 0.76
BRCC3P46736 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
BRCC3P46736 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
BRCC3P46736 AC099343.3-201ENST00000605834 2503 ntBASIC19.78■□□□□ 0.76
BRCC3P46736 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BRCC3P46736 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
BRCC3P46736 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.78■□□□□ 0.76
BRCC3P46736 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.78■□□□□ 0.76
BRCC3P46736 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BRCC3P46736 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BRCC3P46736 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
BRCC3P46736 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.78■□□□□ 0.76
BRCC3P46736 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BRCC3P46736 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BRCC3P46736 TSPY22P-201ENST00000427496 604 ntBASIC19.78■□□□□ 0.76
BRCC3P46736 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.78■□□□□ 0.76
BRCC3P46736 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.78■□□□□ 0.76
BRCC3P46736 KRT8P26-201ENST00000534154 1276 ntBASIC19.78■□□□□ 0.76
BRCC3P46736 KRT126P-201ENST00000549467 1181 ntBASIC19.78■□□□□ 0.76
BRCC3P46736 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
BRCC3P46736 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.78■□□□□ 0.76
BRCC3P46736 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.78■□□□□ 0.76
BRCC3P46736 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
BRCC3P46736 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BRCC3P46736 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BRCC3P46736 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRCC3P46736 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
BRCC3P46736 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
BRCC3P46736 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRCC3P46736 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
BRCC3P46736 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.77■□□□□ 0.76
BRCC3P46736 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRCC3P46736 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRCC3P46736 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
BRCC3P46736 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRCC3P46736 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRCC3P46736 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.77■□□□□ 0.76
BRCC3P46736 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
BRCC3P46736 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRCC3P46736 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
BRCC3P46736 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRCC3P46736 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRCC3P46736 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRCC3P46736 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
BRCC3P46736 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.77■□□□□ 0.76
BRCC3P46736 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.77■□□□□ 0.76
BRCC3P46736 MIR3180-1-201ENST00000580374 94 ntBASIC19.77■□□□□ 0.76
BRCC3P46736 MIR3180-4-201ENST00000582223 153 ntBASIC19.77■□□□□ 0.76
BRCC3P46736 MIR3180-3-201ENST00000584616 94 ntBASIC19.77■□□□□ 0.76
BRCC3P46736 AL121894.2-201ENST00000602977 491 ntBASIC19.77■□□□□ 0.76
BRCC3P46736 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
BRCC3P46736 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.77■□□□□ 0.76
BRCC3P46736 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
BRCC3P46736 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRCC3P46736 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
BRCC3P46736 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.77■□□□□ 0.75
BRCC3P46736 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
BRCC3P46736 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
BRCC3P46736 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
BRCC3P46736 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BRCC3P46736 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BRCC3P46736 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BRCC3P46736 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRCC3P46736 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRCC3P46736 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRCC3P46736 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
BRCC3P46736 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BRCC3P46736 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
BRCC3P46736 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRCC3P46736 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BRCC3P46736 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRCC3P46736 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
BRCC3P46736 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRCC3P46736 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRCC3P46736 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BRCC3P46736 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
BRCC3P46736 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BRCC3P46736 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.76■□□□□ 0.75
BRCC3P46736 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.76■□□□□ 0.75
BRCC3P46736 AC092329.2-201ENST00000598402 547 ntBASIC19.76■□□□□ 0.75
BRCC3P46736 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRCC3P46736 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRCC3P46736 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.76■□□□□ 0.75
BRCC3P46736 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.76■□□□□ 0.75
BRCC3P46736 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.76■□□□□ 0.75
BRCC3P46736 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRCC3P46736 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.75■□□□□ 0.75
BRCC3P46736 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRCC3P46736 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRCC3P46736 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms