Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATRXP46100 AP005212.1-201ENST00000581547 1997 ntBASIC16.96■□□□□ 0.31
ATRXP46100 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.96■□□□□ 0.31
ATRXP46100 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
ATRXP46100 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
ATRXP46100 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATRXP46100 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.96■□□□□ 0.31
ATRXP46100 GPR32P1-201ENST00000601788 811 ntBASIC16.96■□□□□ 0.31
ATRXP46100 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.96■□□□□ 0.31
ATRXP46100 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.96■□□□□ 0.31
ATRXP46100 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.96■□□□□ 0.31
ATRXP46100 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ATRXP46100 HOXB1-202ENST00000577092 1414 ntBASIC16.96■□□□□ 0.31
ATRXP46100 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ATRXP46100 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ATRXP46100 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.95■□□□□ 0.3
ATRXP46100 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATRXP46100 AC132008.2-207ENST00000454517 770 ntBASIC16.95■□□□□ 0.3
ATRXP46100 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.95■□□□□ 0.3
ATRXP46100 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.95■□□□□ 0.3
ATRXP46100 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.95■□□□□ 0.3
ATRXP46100 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.95■□□□□ 0.3
ATRXP46100 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.95■□□□□ 0.3
ATRXP46100 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.95■□□□□ 0.3
ATRXP46100 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATRXP46100 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATRXP46100 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATRXP46100 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATRXP46100 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.95■□□□□ 0.3
ATRXP46100 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATRXP46100 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATRXP46100 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATRXP46100 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATRXP46100 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.95■□□□□ 0.3
ATRXP46100 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.95■□□□□ 0.3
ATRXP46100 AC005498.2-205ENST00000593218 784 ntBASIC16.95■□□□□ 0.3
ATRXP46100 AC114341.1-201ENST00000618070 349 ntBASIC16.95■□□□□ 0.3
ATRXP46100 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATRXP46100 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.95■□□□□ 0.3
ATRXP46100 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
ATRXP46100 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.95■□□□□ 0.3
ATRXP46100 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ATRXP46100 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
ATRXP46100 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ATRXP46100 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ATRXP46100 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
ATRXP46100 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
ATRXP46100 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
ATRXP46100 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATRXP46100 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.94■□□□□ 0.3
ATRXP46100 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATRXP46100 SDHAP1-207ENST00000440850 2000 ntBASIC16.94■□□□□ 0.3
ATRXP46100 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
ATRXP46100 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.94■□□□□ 0.3
ATRXP46100 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATRXP46100 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
ATRXP46100 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATRXP46100 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATRXP46100 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
ATRXP46100 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATRXP46100 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
ATRXP46100 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.94■□□□□ 0.3
ATRXP46100 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.94■□□□□ 0.3
ATRXP46100 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.94■□□□□ 0.3
ATRXP46100 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC16.94■□□□□ 0.3
ATRXP46100 BID-212ENST00000614949 1988 ntTSL 5 BASIC16.94■□□□□ 0.3
ATRXP46100 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATRXP46100 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
ATRXP46100 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATRXP46100 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
ATRXP46100 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATRXP46100 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ATRXP46100 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATRXP46100 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
ATRXP46100 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.93■□□□□ 0.3
ATRXP46100 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ATRXP46100 AC012640.2-201ENST00000561606 901 ntBASIC16.93■□□□□ 0.3
ATRXP46100 AC011840.4-201ENST00000578471 627 ntBASIC16.93■□□□□ 0.3
ATRXP46100 AC027612.4-201ENST00000605371 583 ntBASIC16.93■□□□□ 0.3
ATRXP46100 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATRXP46100 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATRXP46100 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
ATRXP46100 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATRXP46100 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.93■□□□□ 0.3
ATRXP46100 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
ATRXP46100 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATRXP46100 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
ATRXP46100 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.93■□□□□ 0.3
ATRXP46100 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
ATRXP46100 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
ATRXP46100 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.93■□□□□ 0.3
ATRXP46100 RN7SL606P-201ENST00000472779 293 ntBASIC16.93■□□□□ 0.3
ATRXP46100 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
ATRXP46100 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
ATRXP46100 AC069262.1-201ENST00000539058 672 ntBASIC16.93■□□□□ 0.3
ATRXP46100 CR383656.12-201ENST00000549567 513 ntBASIC16.93■□□□□ 0.3
ATRXP46100 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.93■□□□□ 0.3
ATRXP46100 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.93■□□□□ 0.3
ATRXP46100 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.93■□□□□ 0.3
ATRXP46100 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms